RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RASGRP4Q8TDF6 673 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 MRPS27Q92552 414 aaKnown RBP24.31■■□□□ 1.48
CPNE1-220ENST00000458038 PHKBQ93100 1093 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 CCDC136Q96JN2 1154 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 NGRNQ9NPE2 291 aaKnown RBP24.31■■□□□ 1.48
CPNE1-220ENST00000458038 BARX2Q9UMQ3 279 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-220ENST00000458038 USP15Q9Y4E8 981 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-220ENST00000458038 FSCN2O14926 492 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 MSH4O15457 936 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 GAS7O60861 476 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 EOMESO95936 686 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 FGFR1P11362 822 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 KRT17Q04695 432 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 SKAP1Q86WV1 359 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 RSPH1Q8WYR4 309 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 CASD1Q96PB1 797 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 SLC26A6Q9BXS9 759 aa24.3■■□□□ 1.48
CPNE1-220ENST00000458038 REC8O95072 547 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 ERVFC1P60507 584 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 PRKCEQ02156 737 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 KCNT2Q6UVM3 1135 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 ECHDC2Q86YB7 292 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 FAM177A1Q8N128 213 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-220ENST00000458038 LRRC43Q8N309 656 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 SLC5A5Q92911 643 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 ZNF558Q96NG5 402 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 PCDHGC5Q9Y5F6 944 aa24.29■■□□□ 1.48
CPNE1-220ENST00000458038 PER2O15055 1255 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 ZNF862O60290 1169 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 TBC1D8BQ0IIM8 1120 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 LRCH2Q5VUJ6 765 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 TRIM22Q8IYM9 498 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 LRRC71Q8N4P6 559 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 SUSD6Q92537 303 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 TEKT3Q9BXF9 490 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 DACT1Q9NYF0 836 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 SPG21Q9NZD8 308 aa24.28■■□□□ 1.48
CPNE1-220ENST00000458038 ZDBF2Q9HCK1 2354 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 A0A0U1RQF3 1178 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 CARNS1A5YM72 827 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 EPB41L2O43491 1005 aaKnown RBP24.27■■□□□ 1.48
CPNE1-220ENST00000458038 DARSP14868 501 aaKnown RBP24.27■■□□□ 1.48
CPNE1-220ENST00000458038 HOXB8P17481 243 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-220ENST00000458038 PDIA3P30101 505 aaKnown RBP24.27■■□□□ 1.48
CPNE1-220ENST00000458038 GPC3P51654 580 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 NLRP5P59047 1200 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 FBXL18Q96ME1 805 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 SCLT1Q96NL6 688 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 VPS54Q9P1Q0 977 aa24.27■■□□□ 1.48
CPNE1-220ENST00000458038 DNM2P50570 870 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 KCNC3Q14003 757 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 Q4G0T1 1027 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 LRRC55Q6ZSA7 311 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 TRIM67Q6ZTA4 783 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 TCF25Q9BQ70 676 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 NIFKQ9BYG3 293 aaKnown RBP24.26■■□□□ 1.47
CPNE1-220ENST00000458038 ENTPD7Q9NQZ7 604 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 CHST12Q9NRB3 414 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 RNF19AQ9NV58 838 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 HCSTQ9UBK5 93 aa24.26■■□□□ 1.47
CPNE1-220ENST00000458038 CYP3A7-CYP3A51PA0A087WV96 503 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 EDIL3O43854 480 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 PSMD10O75832 226 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 CYP3A7P24462 503 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 ZXDAP98168 799 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 BMS1Q14692 1282 aaKnown RBP24.25■■□□□ 1.47
CPNE1-220ENST00000458038 TARBP2Q15633 366 aaKnown RBP24.25■■□□□ 1.47
CPNE1-220ENST00000458038 XKR3Q5GH77 459 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 PLPP4Q5VZY2 271 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 VN1R2Q8NFZ6 395 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 TBCKQ8TEA7 893 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 PRRX2Q99811 253 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 MRPL9Q9BYD2 267 aaKnown RBP24.25■■□□□ 1.47
CPNE1-220ENST00000458038 GCOM2Q9BZD3 368 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-220ENST00000458038 UNC45AQ9H3U1 944 aa24.25■■□□□ 1.47
CPNE1-220ENST00000458038 TMEM221A6NGB7 291 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 M0R296 226 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 NHLH1Q02575 133 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 SSRP1Q08945 709 aaKnown RBP24.24■■□□□ 1.47
CPNE1-220ENST00000458038 GALNT17Q6IS24 598 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 ANKRD54Q6NXT1 300 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 MIER3Q7Z3K6 550 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 TMC7Q7Z402 723 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 ALYREFQ86V81 257 aaKnown RBP24.24■■□□□ 1.47
CPNE1-220ENST00000458038 NLRP7Q8WX94 980 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 TRAIPQ9BWF2 469 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 INO80BQ9C086 356 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-220ENST00000458038 PCDHA4Q9UN74 947 aa24.24■■□□□ 1.47
CPNE1-220ENST00000458038 CHMP2AO43633 222 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 SKIP12755 728 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 TECP42680 631 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 CCT2P78371 535 aaKnown RBP24.23■■□□□ 1.47
CPNE1-220ENST00000458038 UGCGQ16739 394 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 MOXD1Q6UVY6 613 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 RUFY3Q7L099 469 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 ZNF598Q86UK7 904 aaKnown RBP24.23■■□□□ 1.47
CPNE1-220ENST00000458038 PBXIP1Q96AQ6 731 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 RPGRIP1Q96KN7 1286 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 S1PR5Q9H228 398 aa24.23■■□□□ 1.47
CPNE1-220ENST00000458038 NCOA5Q9HCD5 579 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms