RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TMEM206Q9H813 350 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PARVGQ9HBI0 331 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARHGEF10LQ9HCE6 1279 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 OLFML3Q9NRN5 406 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 HOMER3Q9NSC5 361 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GEMIN8Q9NWZ8 242 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMOD2Q9NZR1 351 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CTTNBP2NLQ9P2B4 639 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM153AQ9UHL3 310 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SALL4Q9UJQ4 1053 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 DNAJC12Q9UKB3 198 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ODF2LQ9ULJ1 636 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SYNPO2Q9UMS6 1093 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PACSIN2Q9UNF0 486 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NOVA2Q9UNW9 492 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PCDHA2Q9Y5H9 948 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 QSER1Q2KHR3 1735 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARFGEF1Q9Y6D6 1849 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 A0A1B0GUA9 196 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 C5orf60A6NFR6 353 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CFAP73A6NFT4 308 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZSCAN5CA6NGD5 496 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L15C9J2P7 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L13C9JLJ4 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L11C9JVI0 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L18D6R9N7 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L22D6RA61 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L17D6RBQ6 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L19D6RCP7 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L20D6RJB6 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 F8W031 263 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 K7ENM7 598 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYO1FO00160 1098 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 RIMBP2O15034 1052 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CLIC2O15247 247 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TTI1O43156 1089 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 DAPK3O43293 454 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRAPPC3O43617 180 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SPOPO43791 374 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 EVI5O60447 810 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 EXOC3O60645 756 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CTNND1O60716 968 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPP1R11O60927 126 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 DNAJC8O75937 253 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 AKAP3O75969 853 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ECEL1O95672 775 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SERPINB2P05120 415 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GSTA1P08263 222 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CYP3A4P08684 503 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 NUDT17P0C025 328 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 POLR2MP0CAP2 368 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 POTEJP0CG39 1038 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 BMP3P12645 472 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ABCB4P21439 1286 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 HOXA10P31260 410 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CIITAP33076 1130 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SHMT1P34896 483 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PDE6BP35913 854 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 STAT3P40763 770 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CETN2P41208 172 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 FMO5P49326 533 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 FNTAP49354 379 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CYP2J2P51589 502 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PRELPP51888 382 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 RBM5P52756 815 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GALCP54803 685 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 DRG2P55039 364 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 HADHBP55084 474 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAGOHP61326 146 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SNRPFP62306 86 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GPC5P78333 572 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 HDLBPQ00341 1268 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CYP4A11Q02928 519 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CAV1Q03135 178 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDR1Q08345 913 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L24Q0WX57 530 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MKRN3Q13064 507 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAPK7Q13164 816 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ITIH4Q14624 930 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 DRAP1Q14919 205 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPP1R7Q15435 360 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GRIK5Q16478 980 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ABCB5Q2M3G0 1257 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CRY2Q49AN0 593 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 LACTB2Q53H82 288 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ANKRD20A8PQ5CZ79 823 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 KIAA1755Q5JYT7 1200 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 RBM26Q5T8P6 1007 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 LRCH2Q5VUJ6 765 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 FBXW10Q5XX13 1052 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TTBK2Q6IQ55 1244 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPP1R2P3Q6NXS1 205 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CDC42EP5Q6NZY7 148 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L6PQ6QN14 398 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 BTNL9Q6UXG8 535 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM196AQ6ZSG2 479 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SYDE1Q6ZW31 735 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 INTS8Q75QN2 995 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CYFIP1Q7L576 1253 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLFN11Q7Z7L1 901 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms