RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 WNT7AO00755 349 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-210ENST00000457104 DARSP14868 501 aaKnown RBP13.9□□□□□ -0.18
VEGFA-210ENST00000457104 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
VEGFA-210ENST00000457104 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 FAM102BQ5T8I3 360 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
VEGFA-210ENST00000457104 IL27Q8NEV9 243 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 P2RX5Q93086 422 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.18
VEGFA-210ENST00000457104 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 LMAN2LQ9H0V9 348 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
VEGFA-210ENST00000457104 PLAGL2Q9UPG8 496 aa13.9□□□□□ -0.18
VEGFA-210ENST00000457104 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
VEGFA-210ENST00000457104 ITGB1P05556 798 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-210ENST00000457104 FGFR4P22455 802 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 DNAJB1P25685 340 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 FOSBP53539 338 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 NSUN3Q9H649 340 aaKnown RBP13.89□□□□□ -0.19
VEGFA-210ENST00000457104 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
VEGFA-210ENST00000457104 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
VEGFA-210ENST00000457104 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
VEGFA-210ENST00000457104 FGFR1P11362 822 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 KCNA5P22460 613 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 NPEPPSP55786 919 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 EPHA7Q15375 998 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 LEXMQ3ZCV2 418 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
VEGFA-210ENST00000457104 KLHL23Q8NBE8 558 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-210ENST00000457104 SPPL3Q8TCT6 385 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
VEGFA-210ENST00000457104 BRMS1Q9HCU9 246 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-210ENST00000457104 RGL1Q9NZL6 768 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
VEGFA-210ENST00000457104 A0A087WZ62 844 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 ZBTB39O15060 712 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 LTBRP36941 435 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 DNM2P50570 870 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 HYAL1Q12794 435 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 NCAPH2Q6IBW4 605 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 KSR1Q8IVT5 923 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 C4orf19Q8IY42 314 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 SLFN12Q8IYM2 578 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 NEK9Q8TD19 979 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 NLRP7Q8WX94 980 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 DYDC2Q96IM9 177 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 FDXACB1Q9BRP7 624 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-210ENST00000457104 LXNQ9BS40 222 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
VEGFA-210ENST00000457104 CWH43Q9H720 699 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
VEGFA-210ENST00000457104 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
VEGFA-210ENST00000457104 SUCLA2Q9P2R7 463 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-210ENST00000457104 A0A0U1RQF3 1178 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 MARCH6O60337 910 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 DKC1O60832 514 aaKnown RBP eCLIP13.86□□□□□ -0.19
VEGFA-210ENST00000457104 SLITRK3O94933 977 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 BAG4O95429 457 aaKnown RBP13.86□□□□□ -0.19
VEGFA-210ENST00000457104 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-210ENST00000457104 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.193e-11■■■■■ 42.3
VEGFA-210ENST00000457104 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 TRIM29Q14134 588 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 LRRC55Q6ZSA7 311 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
VEGFA-210ENST00000457104 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 RHPN2Q8IUC4 686 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 CASD1Q96PB1 797 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
VEGFA-210ENST00000457104 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-210ENST00000457104 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 PCDHA12Q9UN75 941 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 TRIOO75962 3097 aa13.86□□□□□ -0.19
VEGFA-210ENST00000457104 H3BQ06 376 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-210ENST00000457104 ATF7P17544 494 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-210ENST00000457104 YWHABP31946 246 aaKnown RBP13.85□□□□□ -0.19
VEGFA-210ENST00000457104 IRS1P35568 1242 aa13.85□□□□□ -0.19
VEGFA-210ENST00000457104 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
VEGFA-210ENST00000457104 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
VEGFA-210ENST00000457104 CALCRLQ16602 461 aa13.85□□□□□ -0.19
VEGFA-210ENST00000457104 CLLU1OSQ5K130 101 aa13.85□□□□□ -0.19
VEGFA-210ENST00000457104 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
VEGFA-210ENST00000457104 PRPF31Q8WWY3 499 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms