RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 KRT72Q14CN4 511 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 CCBE1Q6UXH8 406 aaPredicted RBP6.14□□□□□ -1.43
VPS41-209ENST00000457055 RASGRP2Q7LDG7 609 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 KIAA0907Q7Z7F0 614 aaPredicted RBP6.14□□□□□ -1.43
VPS41-209ENST00000457055 FAM129CQ86XR2 697 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 HOMER1Q86YM7 354 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 JAMLQ86YT9 394 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 SP8Q8IXZ3 490 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 ZNF654Q8IZM8 581 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 TRIML1Q8N9V2 468 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 NEK9Q8TD19 979 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 NKD1Q969G9 470 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 TRMT2BQ96GJ1 504 aaKnown RBP6.14□□□□□ -1.43
VPS41-209ENST00000457055 SLC9A7Q96T83 725 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 DSCC1Q9BVC3 393 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 DEF6Q9H4E7 631 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 DBNDD1Q9H9R9 158 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 PRR13Q9NZ81 148 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 ATP8A1Q9Y2Q0 1164 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 MAGED1Q9Y5V3 778 aaPredicted RBP6.14□□□□□ -1.43
VPS41-209ENST00000457055 ZMYM3Q14202 1370 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 NEURL4Q96JN8 1562 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 CFAP74Q9C0B2 1584 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 MYO3AQ8NEV4 1616 aa6.14□□□□□ -1.43
VPS41-209ENST00000457055 CLTCQ00610 1675 aaKnown RBP6.14□□□□□ -1.43
VPS41-209ENST00000457055 SGTAO43765 313 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 AKR1B10O60218 316 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 GRK2P25098 689 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 HSPA4P34932 840 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 INHBEP58166 350 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 PLIN5Q00G26 463 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 INF2Q27J81 1249 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 RILPL1Q5EBL4 403 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 CFAP58Q5T655 872 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 AP1ARQ63HQ0 302 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 SWSAP1Q6NVH7 229 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 IRGCQ6NXR0 463 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 MZT2BQ6NZ67 158 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 SYNE3Q6ZMZ3 975 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 NAT16Q8N8M0 369 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 GIMAP8Q8ND71 665 aaPredicted RBP6.13□□□□□ -1.43
VPS41-209ENST00000457055 MAML1Q92585 1016 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 EAF1Q96JC9 268 aaPredicted RBP6.13□□□□□ -1.43
VPS41-209ENST00000457055 FAM81BQ96LP2 452 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 UROC1Q96N76 676 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 JMJD8Q96S16 334 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 NELL2Q99435 816 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 NT5C1AQ9BXI3 368 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 MAK16Q9BXY0 300 aaKnown RBP6.13□□□□□ -1.43
VPS41-209ENST00000457055 TRPV5Q9NQA5 729 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 SIRPGQ9P1W8 387 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 EPS15L1Q9UBC2 864 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 SUCOQ9UBS9 1254 aaKnown RBP6.13□□□□□ -1.43
VPS41-209ENST00000457055 ATP6V0A2Q9Y487 856 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 N6AMT1Q9Y5N5 214 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 PLA2R1Q13018 1463 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 LRRC7Q96NW7 1537 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 DIP2CQ9Y2E4 1556 aa6.13□□□□□ -1.43
VPS41-209ENST00000457055 CEP170BQ9Y4F5 1589 aaPredicted RBP6.13□□□□□ -1.43
VPS41-209ENST00000457055 A0A1W2PQ27 194 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 A0A1W2PQ64 194 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 A0A1W2PQC6 194 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 A0A1W2PQD8 194 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 TRIM64A6NGJ6 449 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 TRIM64BA6NI03 449 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 RASSF10A6NK89 507 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 ALG1L2C9J202 215 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 BUB1BO60566 1050 aaPredicted RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 KRT38O76015 456 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 GSNP06396 782 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 MMEP08473 750 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 DNMT1P26358 1616 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 SMARCA1P28370 1054 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 HPDP32754 393 aaPredicted RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 ADAMTS20P59510 1910 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 ROR1Q01973 937 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 PRPF4BQ13523 1007 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 EIF4A2Q14240 407 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 MYBPC3Q14896 1274 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 SF3B3Q15393 1217 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 PLEKHN1Q494U1 663 aaPredicted RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 RTP2Q5QGT7 225 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 ARMC4Q5T2S8 1044 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 HIBCHQ6NVY1 386 aaPredicted RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 MZT2AQ6P582 158 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 UNC5DQ6UXZ4 953 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 RPTNQ6XPR3 784 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 BTN2A1Q7KYR7 527 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 RSRC2Q7L4I2 434 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 CATSPER4Q7RTX7 472 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 SLITRK4Q8IW52 837 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 C7orf61Q8IZ16 206 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 ZDHHC14Q8IZN3 488 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 ABCA6Q8N139 1617 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 TMEM52Q8NDY8 209 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 GSDMBQ8TAX9 411 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 IPCEF1Q8WWN9 437 aaPredicted RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 JPH3Q8WXH2 748 aaPredicted RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 DHRS1Q96LJ7 313 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms