RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CRIPAKQ8N1N5 446 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 SNX29Q8TEQ0 813 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 NACC1Q96RE7 527 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 MTRQ99707 1265 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 SUCLA2Q9P2R7 463 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-205ENST00000454542 COL4A3BPQ9Y5P4 624 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 SLC26A4O43511 780 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 EIF4BP23588 611 aaKnown RBP15.79■□□□□ 0.12
HDAC4-205ENST00000454542 CCT6AP40227 531 aaKnown RBP15.79■□□□□ 0.12
HDAC4-205ENST00000454542 DNM2P50570 870 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 DSC3Q14574 896 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 ODR4Q5SWX8 454 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 FAM173BQ6P4H8 233 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 Q7L0L9 218 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 TMCO2Q7Z6W1 182 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-205ENST00000454542 SP7Q8TDD2 431 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-205ENST00000454542 TCP11Q8WWU5 503 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 PSPC1Q8WXF1 523 aaKnown RBP15.79■□□□□ 0.12
HDAC4-205ENST00000454542 TOP1MTQ969P6 601 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 AK8Q96MA6 479 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 MSRAQ9UJ68 235 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 ST3GAL5Q9UNP4 418 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 GINS2Q9Y248 185 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 CLIC4Q9Y696 253 aa15.79■□□□□ 0.12
HDAC4-205ENST00000454542 RALGAPA2Q2PPJ7 1873 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 VWA3AA6NCI4 1184 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 GPR182O15218 404 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 MGEA5O60502 916 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 ARHGEF15O94989 841 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 ARL2P36404 184 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 NASPP49321 788 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-205ENST00000454542 GRIN1Q05586 938 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 TMEM119Q4V9L6 283 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 KRT79Q5XKE5 535 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 RTN4RL1Q86UN2 441 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-205ENST00000454542 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-205ENST00000454542 RHPN2Q8IUC4 686 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 KCTD17Q8N5Z5 321 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 DEFB123Q8N688 67 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 TMEM143Q96AN5 459 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 GUCD1Q96NT3 240 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 USP28Q96RU2 1077 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 NKX2-4Q9H2Z4 354 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 IFT122Q9HBG6 1241 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-205ENST00000454542 MTMR10Q9NXD2 777 aa15.78■□□□□ 0.12
HDAC4-205ENST00000454542 A0A087WWV3 80 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 A0A087WZ62 844 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 ENPP3O14638 875 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 USO1O60763 962 aaKnown RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 F13A1P00488 732 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 CA3P07451 260 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 MYOGP15173 224 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 CDC25AP30304 524 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 LAMTOR4Q0VGL1 99 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 PKP1Q13835 747 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 KSR1Q8IVT5 923 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 MCPH1Q8NEM0 835 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 PRPF31Q8WWY3 499 aaKnown RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 NLRP7Q8WX94 980 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 ZNF668Q96K58 619 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 CCDC43Q96MW1 224 aaKnown RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 PNMA5Q96PV4 448 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 RAD9AQ99638 391 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 FDXACB1Q9BRP7 624 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 GCOM2Q9BZD3 368 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 SEMA6BQ9H3T3 888 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 DDX19AQ9NUU7 478 aaKnown RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 FBXO2Q9UK22 296 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-205ENST00000454542 KIAA1024Q9UPX6 916 aa15.77■□□□□ 0.12
HDAC4-205ENST00000454542 KIAA1671Q9BY89 1806 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 LCHNA4D1U4 455 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 TLL1O43897 1013 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 EYA4O95677 639 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 LONP1P36776 959 aaKnown RBP15.76■□□□□ 0.11
HDAC4-205ENST00000454542 POU5F1BQ06416 359 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 NFX1Q12986 1120 aaKnown RBP15.76■□□□□ 0.11
HDAC4-205ENST00000454542 GRB10Q13322 594 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 CAPSQ13938 189 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 ASAP3Q8TDY4 903 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 NLRP4Q96MN2 994 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 NFKBIZQ9BYH8 718 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 ZNF576Q9H609 170 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 RGS18Q9NS28 235 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 C1orf112Q9NSG2 853 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 NLRC5Q86WI3 1866 aa15.76■□□□□ 0.11
HDAC4-205ENST00000454542 ARHGEF35A5YM69 484 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 C9IYK1 514 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 ASAP2O43150 1006 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 CYP11B2P19099 503 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 SFPQP23246 707 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 GLRA2P23416 452 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 SARSP49591 514 aaKnown RBP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 PTENP60484 403 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 TAP1Q03518 808 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms