RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
SMPD4-213ENST00000454468 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 LENG9Q96B70 501 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 RPGRIP1Q96KN7 1286 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 RNF146Q9NTX7 359 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 ANKFY1Q9P2R3 1169 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 WRAP73Q9P2S5 460 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-213ENST00000454468 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 TNNI1P19237 187 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 VPS41P49754 854 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 DPH6Q7L8W6 267 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 FRMD5Q7Z6J6 570 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 TAX1BP1Q86VP1 789 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 CREG2Q8IUH2 290 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 ITGB5P18084 799 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 FMO5P49326 533 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 GALCP54803 685 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 Q4G0T1 1027 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 CBWD6Q4V339 395 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 CBWD3Q5JTY5 395 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 CBWD5Q5RIA9 395 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 CCNI2Q6ZMN8 369 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-213ENST00000454468 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 SLC35C1Q96A29 364 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 AGPAT3Q9NRZ7 376 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 GABBR1Q9UBS5 961 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 PITPNM2Q9BZ72 1349 aa13.01□□□□□ -0.33
SMPD4-213ENST00000454468 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 MYO3BQ8WXR4 1341 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 LRRIQ4A6NIV6 560 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 TBX3O15119 743 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 ATP8B1O43520 1251 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 DLG4P78352 724 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 MCTP2Q6DN12 878 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 GPATCH11Q8N954 259 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 LMBR1Q8WVP7 490 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 PPP1R16BQ96T49 567 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 MXRA8Q9BRK3 442 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 INTS2Q9H0H0 1204 aaKnown RBP13□□□□□ -0.33
SMPD4-213ENST00000454468 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 AMACRQ9UHK6 382 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 PTPN22Q9Y2R2 807 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 ATP2C2O75185 946 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 KRT14P02533 472 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 TUBBP07437 444 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
SMPD4-213ENST00000454468 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 ANKRD35Q8N283 1001 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 ZSWIM2Q8NEG5 633 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 PLCB1Q9NQ66 1216 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 CNOT7Q9UIV1 285 aaKnown RBP13□□□□□ -0.33
SMPD4-213ENST00000454468 NAGPAQ9UK23 515 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 VAV3Q9UKW4 847 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 ASTN1O14525 1302 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 SSU72P8A0A1W2PR75 194 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 FGGP02679 453 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 BCRP11274 1271 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
SMPD4-213ENST00000454468 TNFAIP1Q13829 316 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 EPHA7Q15375 998 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 ZCWPW2Q504Y3 356 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 HGSNATQ68CP4 663 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 MCF2L2Q86YR7 1114 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 KAT5Q92993 513 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 PI4K2AQ9BTU6 479 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 COL20A1Q9P218 1284 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 AJAP1Q9UKB5 411 aaPredicted RBP13□□□□□ -0.33
SMPD4-213ENST00000454468 USTQ9Y2C2 406 aa13□□□□□ -0.33
SMPD4-213ENST00000454468 FOXN3O00409 490 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 ATP9AO75110 1047 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 MARK3P27448 753 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 GMPSP49915 693 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 MXI1P50539 228 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 SPIRE1Q08AE8 756 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 CNPY4Q8N129 248 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 FNBP1Q96RU3 617 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 CELF4Q9BZC1 486 aaKnown RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 TGFB1I1O43294 461 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 GLI1P08151 1106 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 NF2P35240 595 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 SEZ6Q53EL9 994 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 OR2W6PQ8NHA6 318 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 SLC30A5Q8TAD4 765 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms