RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SLC6A3Q01959 620 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ROM1Q03395 351 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 GBX1Q14549 363 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 CLUL1Q15846 466 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 MUM1Q2TAK8 710 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ANO4Q32M45 955 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 TOR2AQ5JU69 321 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ADGRF1Q5T601 910 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRAMEF18Q5VWM3 479 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZC3H14Q6PJT7 736 aaKnown RBP4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 B3GNT9Q6UX72 402 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 UNQ6494/PRO21346Q6UXR6 183 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 IRF2BP1Q8IU81 584 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 FBXO41Q8TF61 875 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ERCC4Q92889 916 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 RUNDC1Q96C34 613 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 CLIP3Q96DZ5 547 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 AMNQ9BXJ7 453 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC6A17Q9H1V8 727 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRDM16Q9HAZ2 1276 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 NGRNQ9NPE2 291 aaKnown RBP4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 UCKL1Q9NWZ5 548 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 DENND2AQ9ULE3 1009 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 WASF3Q9UPY6 502 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 VSTM5A8MXK1 200 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 IL33O95760 270 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 MYL1P05976 194 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 ENO2P09104 434 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 RGS3P49796 1198 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 ADCY2Q08462 1091 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 UBE4AQ14139 1066 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 TRIM25Q14258 630 aaKnown RBP4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 ACAP2Q15057 778 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 ATAT1Q5SQI0 421 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLFN12LQ6IEE8 588 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 CYB5RLQ6IPT4 315 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 CCDC62Q6P9F0 684 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 TMED8Q6PL24 325 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 LRRC56Q8IYG6 542 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 IGDCC4Q8TDY8 1250 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 TSPEARQ8WU66 669 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 AUTS2Q8WXX7 1259 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 PITHD1Q9GZP4 211 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZNF700Q9H0M5 742 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 QRSL1Q9H0R6 528 aaKnown RBP4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 KCTD10Q9H3F6 313 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 INCENPQ9NQS7 918 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRDM11Q9NQV5 511 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 GALNT8Q9NY28 637 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 TUBD1Q9UJT1 453 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 IRS2Q9Y4H2 1338 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 CECR2Q9BXF3 1484 aa4.87□□□□□ -1.63
HMGB1P15-201ENST00000453854 NDUFS2O75306 463 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 LPLP06858 475 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 POU2F2P09086 479 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 OSMP13725 252 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 STAT5AP42229 794 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC5A3P53794 718 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 BCAR1P56945 870 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 NKX3-2P78367 333 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 PURAQ00577 322 aaKnown RBP4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 PFKPQ01813 784 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 STILQ15468 1287 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRAMEF9Q5VWM5 478 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 MBNL2Q5VZF2 373 aaKnown RBP4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 LIPIQ6XZB0 460 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC35G2Q8TBE7 412 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 CALML6Q8TD86 181 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 ALG3Q92685 438 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 FERMT2Q96AC1 680 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 RNF38Q9H0F5 515 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 CSRNP2Q9H175 543 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 BCAS3Q9H6U6 928 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZNF552Q9H707 407 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC39A2Q9NP94 309 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 NMRK2Q9NPI5 230 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRSS50Q9UI38 385 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 EDARQ9UNE0 448 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 MYPNQ86TC9 1320 aa4.86□□□□□ -1.63
HMGB1P15-201ENST00000453854 A0A0A6YYJ9 748 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 TRIM27P14373 513 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 HSPA6P17066 643 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 ECE1P42892 770 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 GPR15P49685 360 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 RHBDL3P58872 404 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 CACNB2Q08289 660 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 NOLC1Q14978 699 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 CCDC178Q5BJE1 867 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 KANK2Q63ZY3 851 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 OLFML2BQ68BL8 750 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 LRSAM1Q6UWE0 723 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZC3H18Q86VM9 953 aaKnown RBP4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRR18Q8N4B5 295 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 FAM26EQ8N5C1 309 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 FBXO15Q8NCQ5 510 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms