RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 RFFLQ8WZ73 363 aa14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 SAAL1Q96ER3 474 aa14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 PABPC3Q9H361 631 aaKnown RBP14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 UBE2TQ9NPD8 197 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 PARP2Q9UGN5 583 aa14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 SLC12A6Q9UHW9 1150 aa14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 USTQ9Y2C2 406 aa14.96□□□□□ -0.01
UBE2D3-210ENST00000453744 PASKQ96RG2 1323 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 CTTNQ14247 550 aaKnown RBP14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 CRYMQ14894 314 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 SLC35G1Q2M3R5 365 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 ZNF365Q70YC5 407 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 AGAP11Q8TF27 550 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 P3H4Q92791 437 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 DHX36Q9H2U1 1008 aaKnown RBP14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 ARFGEF2Q9Y6D5 1785 aa14.96□□□□□ -0.02
UBE2D3-210ENST00000453744 TMEM120BA0PK00 339 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 LCA5LO95447 670 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 NMT1P30419 496 aaKnown RBP14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 CASP5P51878 434 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 PDIA5Q14554 519 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 LMNTD2Q8IXW0 634 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 SCFD2Q8WU76 684 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 PLVAPQ9BX97 442 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 THAP2Q9H0W7 228 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 FOXO6A8MYZ6 492 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 GNPATO15228 680 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 SMIM24O75264 130 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 AKAP3O75969 853 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 FTLP02792 175 aaPredicted RBP14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 KRT5P13647 590 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 TMED2Q15363 201 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 PPP2R5EQ16537 467 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 FBXO33Q7Z6M2 555 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 FAM178BQ8IXR5 827 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 ZNF622Q969S3 477 aaKnown RBP eCLIP14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 FAM196BA6NMK8 535 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 CYP11B2P19099 503 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 SEPT14Q6ZU15 432 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 ARMC2Q8NEN0 867 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 FAM118BQ9BPY3 351 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 REEP2Q9BRK0 252 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 IKZF4Q9H2S9 585 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 KDM4CQ9H3R0 1056 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 ATP6V0A4Q9HBG4 840 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 RGL1Q9NZL6 768 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 AIPL1Q9NZN9 384 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 TRIM33Q9UPN9 1127 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 RABGAP1Q9Y3P9 1069 aa14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 USP15Q9Y4E8 981 aaPredicted RBP14.95□□□□□ -0.02
UBE2D3-210ENST00000453744 WDR91A4D1P6 747 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 DDX3XO00571 662 aaKnown RBP eCLIP14.94□□□□□ -0.022e-17■■■■□ 23.8
UBE2D3-210ENST00000453744 ATP5DP30049 168 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 HOXA13P31271 388 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 PSMC2P35998 433 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 SGO2Q562F6 1265 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 AP1ARQ63HQ0 302 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ZNF572Q7Z3I7 529 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 TGS1Q96RS0 853 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 SUCLA2Q9P2R7 463 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ALDH3A1P30838 453 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ALDH5A1P51649 535 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 MYL7Q01449 175 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 MUM1Q2TAK8 710 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ZC2HC1CQ53FD0 456 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 STXBP4Q6ZWJ1 553 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 CROCCP2Q86T23 111 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 PITPNM3Q9BZ71 974 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 PPP1R1BQ9UD71 204 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ALG6Q9Y672 507 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 A8MUI8 341 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 TOM1O60784 492 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 SPAG7O75391 227 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ECEL1O95672 775 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 DLATP10515 647 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 NQO1P15559 274 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 SCNN1DP51172 638 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 PSMC6P62333 389 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 GTF2IP78347 998 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 KCNA1Q09470 495 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 SEPT2Q15019 361 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 ERMARDQ5T6L9 678 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 HEMGNQ9BXL5 484 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 CPSF2Q9P2I0 782 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 THRAP3Q9Y2W1 955 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 MYH6P13533 1939 aa14.94□□□□□ -0.02
UBE2D3-210ENST00000453744 BCRP11274 1271 aa14.93□□□□□ -0.02
UBE2D3-210ENST00000453744 GRIK5Q16478 980 aa14.93□□□□□ -0.02
UBE2D3-210ENST00000453744 ODR4Q5SWX8 454 aa14.93□□□□□ -0.02
UBE2D3-210ENST00000453744 NT5DC3Q86UY8 548 aa14.93□□□□□ -0.02
UBE2D3-210ENST00000453744 SPICE1Q8N0Z3 855 aa14.93□□□□□ -0.02
UBE2D3-210ENST00000453744 NEDD1Q8NHV4 660 aa14.93□□□□□ -0.02
UBE2D3-210ENST00000453744 CCT6BQ92526 530 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms