RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 KIAA1217Q5T5P2 1943 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 EPHB6O15197 1021 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 GJB1P08034 283 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 CASP5P51878 434 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 EDRF1Q3B7T1 1238 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 ZNF569Q5MCW4 686 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 PPP4R3CPQ6ZMV5 832 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 ZNF397Q8NF99 534 aaPredicted RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 MORC4Q8TE76 937 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 RUSC1Q9BVN2 902 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 BHMT2Q9H2M3 363 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 MYO1AQ9UBC5 1043 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 ZHX1Q9UKY1 873 aaPredicted RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 GNA14O95837 355 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 EDNRBP24530 442 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 SETQ01105 290 aaPredicted RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 ACVR2BQ13705 512 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 SAMD3Q8N6K7 520 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 MNS1Q8NEH6 495 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 NSUN6Q8TEA1 469 aaKnown RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 U2AF1L4Q8WU68 220 aaKnown RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 ABHD16BQ9H3Z7 469 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 ZNHIT6Q9NWK9 470 aaKnown RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 EFCAB8A8MWE9 144 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 GAS7O60861 476 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 SLITRK3O94933 977 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 ARP10275 920 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 HOXD13P35453 343 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 BMT2Q1RMZ1 405 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 ARHGEF16Q5VV41 709 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 LHX8Q68G74 356 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 TRIM59Q8IWR1 403 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 SLC35F6Q8N357 371 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 ZHX3Q9H4I2 956 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 NHEJ1Q9H9Q4 299 aaPredicted RBP11.78□□□□□ -0.52
PKP4-206ENST00000452162 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
PKP4-206ENST00000452162 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 EIF3CLB5ME19 914 aaKnown RBP11.77□□□□□ -0.52
PKP4-206ENST00000452162 SEPT4O43236 478 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 SGPL1O95470 568 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 RSPH10BP0C881 870 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 MUTP22033 750 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.52
PKP4-206ENST00000452162 GJA8P48165 433 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 PPP2R3AQ06190 1150 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 KCNMA1Q12791 1236 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 FBXO38Q6PIJ6 1188 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 IL31RAQ8NI17 732 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 BAP1Q92560 729 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 LENG1Q96BZ8 264 aaPredicted RBP11.77□□□□□ -0.52
PKP4-206ENST00000452162 EIF3CQ99613 913 aaKnown RBP11.77□□□□□ -0.52
PKP4-206ENST00000452162 MXRA8Q9BRK3 442 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 ZNF577Q9BSK1 485 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 WDR11Q9BZH6 1224 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 EDEM3Q9BZQ6 932 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.52
PKP4-206ENST00000452162 DDX20Q9UHI6 824 aaKnown RBP11.77□□□□□ -0.52
PKP4-206ENST00000452162 PLAGL2Q9UPG8 496 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 TRAF3IP3Q9Y228 551 aa11.77□□□□□ -0.52
PKP4-206ENST00000452162 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 ADCY6O43306 1168 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 CHMP2AO43633 222 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 NR3C2P08235 984 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 MYBP10242 640 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 H2AFXP16104 143 aaPredicted RBP11.77□□□□□ -0.53
PKP4-206ENST00000452162 KRT83P78385 493 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 PWP2Q15269 919 aaKnown RBP11.77□□□□□ -0.53
PKP4-206ENST00000452162 TMEM63BQ5T3F8 832 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 TAPT1Q6NXT6 567 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
PKP4-206ENST00000452162 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 HAUS4Q9H6D7 363 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 MMRN2Q9H8L6 949 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.53
PKP4-206ENST00000452162 FRMPD4Q14CM0 1322 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 TBCAO75347 108 aaKnown RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 GAP43P17677 238 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 ITGB5P18084 799 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 ADCYAP1R1P41586 468 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 PGM5Q15124 567 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 EPHA7Q15375 998 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms