RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 TUFT1Q9NNX1 390 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 RGS18Q9NS28 235 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 SUCLA2Q9P2R7 463 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 AKT3Q9Y243 479 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 RFXAPO00287 272 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 RPA1P27694 616 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 RFC5P40937 340 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 PRPHP41219 470 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 RARRES1P49788 294 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 OTUD6AQ7L8S5 288 aa18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 ZNF668Q96K58 619 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 JPH2Q9BR39 696 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-205ENST00000452128 UPP2O95045 317 aa18■□□□□ 0.47
SCAMP4-205ENST00000452128 NFX1Q12986 1120 aaKnown RBP18■□□□□ 0.47
SCAMP4-205ENST00000452128 KSR1Q8IVT5 923 aa18■□□□□ 0.47
SCAMP4-205ENST00000452128 EXOC8Q8IYI6 725 aa18■□□□□ 0.47
SCAMP4-205ENST00000452128 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
SCAMP4-205ENST00000452128 ADAM2Q99965 735 aa18■□□□□ 0.47
SCAMP4-205ENST00000452128 REV3LO60673 3130 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 A0A087WZ62 844 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 LAD1O00515 517 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 CSDE1O75534 798 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 FOSL2P15408 326 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 MUTP22033 750 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 ARL2P36404 184 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 SARSP49591 514 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 DNM2P50570 870 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 ATP2C1P98194 919 aaPredicted RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 GNL2Q13823 731 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 XKR9Q5GH70 373 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 SLC24A5Q71RS6 500 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 NPAS4Q8IUM7 802 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 PIGOQ8TEQ8 1089 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 CLP1Q92989 425 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 TGS1Q96RS0 853 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 MMTAG2Q9BU76 263 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 CERS4Q9HA82 394 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 LOXHD1Q8IVV2 1947 aa17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 SPTBN5Q9NRC6 3674 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-205ENST00000452128 UNC80Q8N2C7 3258 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 H3BQV1 296 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 K7ELQ4 463 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 GAS2O43903 313 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 SYT1P21579 422 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 LAMTOR4Q0VGL1 99 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 EMC2Q15006 297 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 ODR4Q5SWX8 454 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 MCTP1Q6DN14 999 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 FERMT3Q86UX7 667 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 MAFAQ8NHW3 353 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 SLC7A3Q8WY07 619 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 C17orf80Q9BSJ5 609 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 TRAIPQ9BWF2 469 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 RNF19AQ9NV58 838 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 MTCH2Q9Y6C9 303 aa17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 PRRC2BQ5JSZ5 2229 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-205ENST00000452128 FGFR4P22455 802 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 POU5F1BQ06416 359 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 GRB10Q13322 594 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 RHPN2Q8IUC4 686 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 NACC1Q96RE7 527 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 YME1L1Q96TA2 773 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 GCOM2Q9BZD3 368 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 ELAC1Q9H777 363 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 MINDY3Q9H8M7 445 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 C1orf112Q9NSG2 853 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 COL4A3BPQ9Y5P4 624 aa17.97■□□□□ 0.47
SCAMP4-205ENST00000452128 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 ASAP2O43150 1006 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 DGAT1O75907 488 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 POLGP54098 1239 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 POTEGQ6S5H5 508 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 BRAPQ7Z569 592 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 ASAP3Q8TDY4 903 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 NLRP7Q8WX94 980 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 PSPC1Q8WXF1 523 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
SCAMP4-205ENST00000452128 A0A0U1RQF3 1178 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 PP2D1A8MPX8 630 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 PTENP60484 403 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 RESTQ13127 1097 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 EPC2Q52LR7 807 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 HYIQ5T013 277 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 ARL6IP4Q66PJ3 421 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 TCP11Q8WWU5 503 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 GAS2L1Q99501 681 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 TMEM161AQ9NX61 479 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms