RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RSPH3Q86UC2 560 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 EXOC8Q8IYI6 725 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 IQUBQ8NA54 791 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 GPT2Q8TD30 523 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 ZNF668Q96K58 619 aaPredicted RBP14.47□□□□□ -0.09
VPS33A-202ENST00000451053 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 POLR3FQ9H1D9 316 aaPredicted RBP14.47□□□□□ -0.09
VPS33A-202ENST00000451053 SUCLA2Q9P2R7 463 aaPredicted RBP14.47□□□□□ -0.09
VPS33A-202ENST00000451053 PRKAG2Q9UGJ0 569 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 NR2E3Q9Y5X4 410 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 CDY2AQ9Y6F7 541 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 LTBP2Q14767 1821 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 TANC1Q9C0D5 1861 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 SIP14410 1827 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 ACTN4O43707 911 aaKnown RBP14.46□□□□□ -0.09
VPS33A-202ENST00000451053 GAS2O43903 313 aaKnown RBP14.46□□□□□ -0.09
VPS33A-202ENST00000451053 CAND2O75155 1236 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 CHRNA1P02708 482 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 DNM2P50570 870 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 MGAT3Q09327 533 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 FAM26DQ5JW98 314 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 FAM102BQ5T8I3 360 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 IER5Q5VY09 327 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 SV2BQ7L1I2 683 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 LRRC8DQ7L1W4 858 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 NME8Q8N427 588 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 MCPH1Q8NEM0 835 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 ASAP3Q8TDY4 903 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 TCP11Q8WWU5 503 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 PRPF31Q8WWY3 499 aaKnown RBP14.46□□□□□ -0.09
VPS33A-202ENST00000451053 STAMQ92783 540 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 CCDC34Q96HJ3 373 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 SCLYQ96I15 445 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 OSBPL7Q9BZF2 842 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 CDHR5Q9HBB8 845 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 SERTAD1Q9UHV2 236 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 TRPV2Q9Y5S1 764 aa14.46□□□□□ -0.09
VPS33A-202ENST00000451053 RSPH10B2B2RC85 870 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 KINO60870 393 aaKnown RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 HIP1RO75146 1068 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 GPR32O75388 356 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 RPLP2P05387 115 aaKnown RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 IQCF3P0C7M6 154 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 RSPH10BP0C881 870 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 GUCY2CP25092 1073 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 ARL2P36404 184 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 SYKP43405 635 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 NLRP11P59045 1033 aaKnown RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 MLLT1Q03111 559 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 LAMTOR4Q0VGL1 99 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 MAPK7Q13164 816 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 MBTPS1Q14703 1052 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 KIZQ2M2Z5 673 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 LONRF3Q496Y0 759 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 RHPN2Q8IUC4 686 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 KSR1Q8IVT5 923 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 DAW1Q8N136 415 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 PSPC1Q8WXF1 523 aaKnown RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 BSNDQ8WZ55 320 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 CELF4Q9BZC1 486 aaKnown RBP14.45□□□□□ -0.1
VPS33A-202ENST00000451053 ADAMTS10Q9H324 1103 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 CUEDC2Q9H467 287 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 COL4A3BPQ9Y5P4 624 aa14.45□□□□□ -0.1
VPS33A-202ENST00000451053 MYMKA6NI61 221 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 M0QZ92 97 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 ZNF202O95125 648 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 SLFN14P0C7P3 912 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 LIG1P18858 919 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 GLRA2P23416 452 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 GPC3P51654 580 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 GPNMBQ14956 572 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 MFSD5Q6N075 450 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 GRAMD1CQ8IYS0 662 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 ENGASEQ8NFI3 743 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 BADQ92934 168 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 NLRP4Q96MN2 994 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 OSMRQ99650 979 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 REEP2Q9BRK0 252 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 KBTBD4Q9NVX7 518 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 KCND2Q9NZV8 630 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 USP25Q9UHP3 1055 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 GINS2Q9Y248 185 aa14.44□□□□□ -0.1
VPS33A-202ENST00000451053 MKI67P46013 3256 aaKnown RBP14.43□□□□□ -0.1
VPS33A-202ENST00000451053 SCN5AQ14524 2016 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 A0A087WZ62 844 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.43□□□□□ -0.1
VPS33A-202ENST00000451053 SFI1A8K8P3 1242 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 H0YGN5 161 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 NBNO60934 754 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
VPS33A-202ENST00000451053 CSF2RAP15509 400 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 AFMP43652 599 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 SNW1Q13573 536 aaKnown RBP14.43□□□□□ -0.1
VPS33A-202ENST00000451053 CAPSQ13938 189 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 GIT2Q14161 759 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 CCDC183Q5T5S1 534 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 DYMQ7RTS9 669 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 CEP57L1Q8IYX8 460 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 FMR1NBQ8N0W7 255 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms