RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 DYDC2Q96IM9 177 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 CCDC43Q96MW1 224 aaKnown RBP17.37■□□□□ 0.37
LIMS1-210ENST00000449684 ASB2Q96Q27 587 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 C11orf84Q9BUA3 381 aaPredicted RBP17.37■□□□□ 0.37
LIMS1-210ENST00000449684 INO80BQ9C086 356 aaPredicted RBP17.37■□□□□ 0.37
LIMS1-210ENST00000449684 ZSWIM4Q9H7M6 989 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 TTC12Q9H892 705 aaPredicted RBP17.37■□□□□ 0.37
LIMS1-210ENST00000449684 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 RGL1Q9NZL6 768 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 KIF3AQ9Y496 699 aa17.37■□□□□ 0.37
LIMS1-210ENST00000449684 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
LIMS1-210ENST00000449684 MGEA5O60502 916 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 MAFO75444 373 aaPredicted RBP17.36■□□□□ 0.37
LIMS1-210ENST00000449684 STBD1O95210 358 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 DARSP14868 501 aaKnown RBP17.36■□□□□ 0.37
LIMS1-210ENST00000449684 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
LIMS1-210ENST00000449684 MCM7P33993 719 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 NPEPPSP55786 919 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 CYP4A11Q02928 519 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 CTTNQ14247 550 aaKnown RBP17.36■□□□□ 0.37
LIMS1-210ENST00000449684 XKR9Q5GH70 373 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 C4orf19Q8IY42 314 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 MRPL38Q96DV4 380 aaKnown RBP17.36■□□□□ 0.37
LIMS1-210ENST00000449684 ATP6V0A4Q9HBG4 840 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 PPME1Q9Y570 386 aa17.36■□□□□ 0.37
LIMS1-210ENST00000449684 CUL9Q8IWT3 2517 aa17.35■□□□□ 0.37
LIMS1-210ENST00000449684 TIGD5Q53EQ6 642 aa17.35■□□□□ 0.37
LIMS1-210ENST00000449684 FBXO18Q8NFZ0 1043 aa17.35■□□□□ 0.37
LIMS1-210ENST00000449684 CLP1Q92989 425 aaKnown RBP17.35■□□□□ 0.37
LIMS1-210ENST00000449684 NLRP4Q96MN2 994 aa17.35■□□□□ 0.37
LIMS1-210ENST00000449684 EIF2AK1Q9BQI3 630 aaKnown RBP17.35■□□□□ 0.37
LIMS1-210ENST00000449684 FOXP1Q9H334 677 aaPredicted RBP17.35■□□□□ 0.37
LIMS1-210ENST00000449684 RC3H2Q9HBD1 1191 aaKnown RBP17.35■□□□□ 0.37
LIMS1-210ENST00000449684 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
LIMS1-210ENST00000449684 COL4A6Q14031 1691 aa17.35■□□□□ 0.37
LIMS1-210ENST00000449684 A0A087WZ62 844 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 IGKV6-21A0A0C4DH24 114 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 TBKBP1A7MCY6 615 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 C9IYK1 514 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 FGFR4P22455 802 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 SFPQP23246 707 aaKnown RBP eCLIP17.34■□□□□ 0.37
LIMS1-210ENST00000449684 RFC5P40937 340 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 TFF2Q03403 129 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 DRP2Q13474 957 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 ZNF410Q86VK4 478 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 NLRC5Q86WI3 1866 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 ABI1Q8IZP0 508 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 RNF169Q8NCN4 708 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 NEK9Q8TD19 979 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 TCP11Q8WWU5 503 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 FDXACB1Q9BRP7 624 aaPredicted RBP17.34■□□□□ 0.37
LIMS1-210ENST00000449684 PLVAPQ9BX97 442 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 AAASQ9NRG9 546 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
LIMS1-210ENST00000449684 TMEM161AQ9NX61 479 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
LIMS1-210ENST00000449684 MRPL42Q9Y6G3 142 aaKnown RBP17.34■□□□□ 0.37
LIMS1-210ENST00000449684 C5orf67F2Z3F1 127 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 HOXA2O43364 376 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 CSDE1O75534 798 aaKnown RBP17.33■□□□□ 0.36
LIMS1-210ENST00000449684 CSPG5O95196 566 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 GATMP50440 423 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 SPIRE1Q08AE8 756 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 ZNF174Q15697 407 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 EP400NLQ6ZTU2 488 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 CRIPAKQ8N1N5 446 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 PSPC1Q8WXF1 523 aaKnown RBP17.33■□□□□ 0.36
LIMS1-210ENST00000449684 CEP89Q96ST8 783 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 LMAN2LQ9H0V9 348 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 ELAC1Q9H777 363 aaKnown RBP17.33■□□□□ 0.36
LIMS1-210ENST00000449684 WRAP73Q9P2S5 460 aaPredicted RBP17.33■□□□□ 0.36
LIMS1-210ENST00000449684 RALGAPA2Q2PPJ7 1873 aa17.33■□□□□ 0.36
LIMS1-210ENST00000449684 GAS2O43903 313 aaKnown RBP17.32■□□□□ 0.36
LIMS1-210ENST00000449684 SLITRK3O94933 977 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 DSC3Q14574 896 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 FAM102BQ5T8I3 360 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 CATSPER4Q7RTX7 472 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 NOSTRINQ8IVI9 506 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 KSR1Q8IVT5 923 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 ZNF579Q8NAF0 562 aaKnown RBP17.32■□□□□ 0.36
LIMS1-210ENST00000449684 TMEM143Q96AN5 459 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 MTRQ99707 1265 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 NSUN3Q9H649 340 aaKnown RBP17.32■□□□□ 0.36
LIMS1-210ENST00000449684 ALG13Q9NP73 1137 aaKnown RBP17.32■□□□□ 0.36
LIMS1-210ENST00000449684 PCDHB12Q9Y5F1 795 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 COL4A3BPQ9Y5P4 624 aa17.32■□□□□ 0.36
LIMS1-210ENST00000449684 WNT7AO00755 349 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 GRM6O15303 877 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 SRGAP2CP0DJJ0 459 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 FGFR1P11362 822 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 MCM2P49736 904 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 FAM189BP81408 668 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 ORC2Q13416 577 aaPredicted RBP17.31■□□□□ 0.36
LIMS1-210ENST00000449684 EMC2Q15006 297 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 NAALADL2Q58DX5 795 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 TTC38Q5R3I4 469 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
LIMS1-210ENST00000449684 TWF2Q6IBS0 349 aaKnown RBP17.31■□□□□ 0.36
LIMS1-210ENST00000449684 ERMNQ8TAM6 284 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms