RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CNOT8Q9UFF9 292 aaKnown RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 LRRD1A4D1F6 860 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 KRT1P04264 644 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 PSAPP07602 524 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 TRIM68Q6AZZ1 485 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 DNAJC24Q6P3W2 148 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 LRRC8CQ8TDW0 803 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 LACRTQ9GZZ8 138 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 EHD4Q9H223 541 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 EFCC1Q9HA90 598 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 ANAPC7Q9UJX3 599 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 SSX2IPQ9Y2D8 614 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 AFF2P51816 1311 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 ACTN1P12814 892 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 BMP6P22004 513 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 SEC24CP53992 1094 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 GPC5P78333 572 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 KCTD2Q14681 263 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 SLMAPQ14BN4 828 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 SDCCAG8Q86SQ7 713 aaPredicted RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 TXNRD3Q86VQ6 643 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 RFX6Q8HWS3 928 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 TEX2Q8IWB9 1127 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 SULF1Q8IWU6 871 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 RPUSD2Q8IZ73 545 aaKnown RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 LBHD1Q9BQE6 289 aaPredicted RBP7.7□□□□□ -1.18
BEST1-202ENST00000449131 LXNQ9BS40 222 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 NOD1Q9Y239 953 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 MAD1L1Q9Y6D9 718 aa7.7□□□□□ -1.18
BEST1-202ENST00000449131 FTLP02792 175 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 CA8P35219 290 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 RASSF2P50749 326 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 VAMP7P51809 220 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 EIF3BP55884 814 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 IL9RQ01113 521 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TMED2Q15363 201 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 ZNF394Q53GI3 561 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 ARHGAP27Q6ZUM4 889 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TADA2BQ86TJ2 420 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SESTD1Q86VW0 696 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 DDX42Q86XP3 938 aaKnown RBP eCLIP7.69□□□□□ -1.18
BEST1-202ENST00000449131 MYCBPQ99417 103 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 HEMGNQ9BXL5 484 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 ADAM33Q9BZ11 813 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SYNJ2BP-COX16A0A087WUM0 186 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TCRBV5S4A2TA0A5A2 114 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 MIF4GDA9UHW6 222 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 EYA4O95677 639 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 NDUFB10O96000 172 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 MAGEA9P43362 315 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 GEN1Q17RS7 908 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 EAPPQ56P03 285 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 SCARA5Q6ZMJ2 495 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 LMNTD2Q8IXW0 634 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 FAM81BQ96LP2 452 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 APOL6Q9BWW8 343 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 INTS2Q9H0H0 1204 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 JMJD4Q9H9V9 463 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 COX16Q9P0S2 106 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 MAD2L2Q9UI95 211 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 PDS5AQ29RF7 1337 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 PIK3C2AO00443 1686 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 PDXKO00764 312 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 P4HBP07237 508 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 VEGFAP15692 232 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 QARSP47897 775 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 SLC18A3Q16572 532 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 CEP55Q53EZ4 464 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 BEND6Q5SZJ8 279 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 HIBCHQ6NVY1 386 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 CDC42EP5Q6NZY7 148 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 FRMD5Q7Z6J6 570 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 ARHGAP24Q8N264 748 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 ATP2A3Q93084 1043 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SAAL1Q96ER3 474 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 ANKRD36BP1Q96IX9 119 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 MSTO1Q9BUK6 570 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 CALN1Q9BXU9 219 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SEL1LQ9UBV2 794 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 A0A087X0B3 334 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 GPR75-ASB3A0A0A6YYF3 556 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SSU72P8A0A1W2PR75 194 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 DENND3A2RUS2 1198 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 PABPN1LA6NDY0 278 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 WDR64B1ANS9 1081 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 CAPN9O14815 690 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 HIP1RO75146 1068 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SLC9A1P19634 815 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 SESN3P58005 492 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TFDP1Q14186 410 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 PKN1Q16512 942 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TSNAXIP1Q2TAA8 658 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 PASD1Q8IV76 773 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 MAP7D3Q8IWC1 876 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 RTKN2Q8IZC4 609 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms