RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 CPA4Q9UI42 421 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 PHLPP1O60346 1717 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 EIF3CLB5ME19 914 aaKnown RBP11.3□□□□□ -0.6
SP4-204ENST00000448246 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 RNF40O75150 1001 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 GCLMP48507 274 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 HERVK_113P62684 666 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 ZBED6P86452 979 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 RBL2Q08999 1139 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 KRT31Q15323 416 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 OR6B3Q8NGW1 331 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 EIF3CQ99613 913 aaKnown RBP11.3□□□□□ -0.6
SP4-204ENST00000448246 KATNAL1Q9BW62 490 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
SP4-204ENST00000448246 GOLGA6BA6NDN3 693 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 GOLGA8SH3BPF8 625 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 BFSP1Q12934 665 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 KRT81Q14533 505 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 MAIP1Q8WWC4 291 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 MRC1P22897 1456 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 MAGEB2O15479 319 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 RGS2P41220 211 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 USP49Q70CQ1 688 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 GLT1D1Q96MS3 346 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 FUT8Q9BYC5 575 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 RAB20Q9NX57 234 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 PSD3Q9NYI0 1048 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 MED7O43513 233 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 PGK2P07205 417 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 PANX2Q96RD6 677 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 ERAP1Q9NZ08 941 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 SMIM23A6NLE4 172 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 KCNK3O14649 394 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 FOXN1O15353 648 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 CLUL1Q15846 466 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 ZNF394Q53GI3 561 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 SREK1Q8WXA9 508 aaKnown RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 MYCBPQ99417 103 aaPredicted RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 MOV10L1Q9BXT6 1211 aaKnown RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 SPATC1LQ9H0A9 340 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
SP4-204ENST00000448246 IL17RBQ9NRM6 502 aa11.29□□□□□ -0.6
SP4-204ENST00000448246 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 MAPK4P31152 587 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 LIG3P49916 1009 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 MESDQ14696 234 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 PPP1R21Q6ZMI0 780 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 GPRASP2Q96D09 838 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 HEXIM2Q96MH2 286 aaKnown RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 HAUS2Q9NVX0 235 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 UTP11Q9Y3A2 253 aaKnown RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 PDHXO00330 501 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 RPA1P27694 616 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 NMT1P30419 496 aaKnown RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 PRKCEQ02156 737 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 PPATQ06203 517 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 MXD4Q14582 209 aaPredicted RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 TRIM65Q6PJ69 517 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 SAAL1Q96ER3 474 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 RIOX1Q9H6W3 641 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 NFIBO00712 420 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 PPFIA4O75335 1185 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 CTSHP09668 335 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 ACRBPQ8NEB7 543 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 BEST2Q8NFU1 509 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 PAIP2Q9BPZ3 127 aaKnown RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
SP4-204ENST00000448246 TUBE1Q9UJT0 475 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 BCL9LQ86UU0 1499 aa11.28□□□□□ -0.6
SP4-204ENST00000448246 HUS1O60921 280 aa11.27□□□□□ -0.6
SP4-204ENST00000448246 SASH3O75995 380 aa11.27□□□□□ -0.6
SP4-204ENST00000448246 CDC42EP1Q00587 391 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms