RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 CWC22Q9HCG8 908 aaKnown RBP7.31□□□□□ -1.24
USP49-205ENST00000448078 TNFRSF10DQ9UBN6 386 aa7.31□□□□□ -1.24
USP49-205ENST00000448078 CPA4Q9UI42 421 aa7.31□□□□□ -1.24
USP49-205ENST00000448078 DIS3Q9Y2L1 958 aaKnown RBP7.31□□□□□ -1.24
USP49-205ENST00000448078 FAM205AQ6ZU69 1335 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 DDX60Q8IY21 1712 aaKnown RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 TMEM82A0PJX8 343 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 ANKRD34BA5PLL1 514 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 ZNF503-AS2A6NEH8 195 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 TCP10L2B9ZVM9 353 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 PSPNO60542 156 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 ETFBP38117 255 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 ARL4AP40617 200 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 KIR2DL1P43626 348 aaPredicted RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 KIR2DL2P43627 348 aaPredicted RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 SEPHS1P49903 392 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 AMPD2Q01433 879 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 SV2CQ496J9 727 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 TAF7LQ5H9L4 462 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 ADGRF1Q5T601 910 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 CCDC30Q5VVM6 783 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 FAM109BQ6ICB4 259 aaPredicted RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 FASTKD5Q7L8L6 764 aaKnown RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 UBE2Q1Q7Z7E8 422 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 SHISA4Q96DD7 197 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 PAWRQ96IZ0 340 aaKnown RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 WRNIP1Q96S55 665 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 GDF15Q99988 308 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 STK31Q9BXU1 1019 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 GREM2Q9H772 168 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 TDRD3Q9H7E2 651 aaKnown RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 PRKAG3Q9UGI9 489 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 AKT3Q9Y243 479 aa7.3□□□□□ -1.24
USP49-205ENST00000448078 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
USP49-205ENST00000448078 LAMB4A4D0S4 1761 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 STXBP3O00186 592 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 TNPO2O14787 897 aaKnown RBP7.29□□□□□ -1.24
USP49-205ENST00000448078 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 VAMP4O75379 141 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 IL1R1P14778 569 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 CHRNDQ07001 517 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 IFIT5Q13325 482 aaKnown RBP7.29□□□□□ -1.24
USP49-205ENST00000448078 TIGD5Q53EQ6 642 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 NAALADL2Q58DX5 795 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 GALNT18Q6P9A2 607 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 C6orf15Q6UXA7 325 aaPredicted RBP7.29□□□□□ -1.24
USP49-205ENST00000448078 KSR2Q6VAB6 950 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 C15orf52Q6ZUT6 534 aaKnown RBP7.29□□□□□ -1.24
USP49-205ENST00000448078 ZNF605Q86T29 641 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 NUP43Q8NFH3 380 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.29□□□□□ -1.24
USP49-205ENST00000448078 TBC1D22AQ8WUA7 517 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 ZNF341Q9BYN7 854 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 TRIM55Q9BYV6 548 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 KLHL25Q9H0H3 589 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 MYH16Q9H6N6 1097 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 MAP3K2Q9Y2U5 619 aa7.29□□□□□ -1.24
USP49-205ENST00000448078 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 IRS2Q9Y4H2 1338 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 RBBP6Q7Z6E9 1792 aaKnown RBP7.28□□□□□ -1.24
USP49-205ENST00000448078 CXCL11O14625 94 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 STK10O94804 968 aaKnown RBP7.28□□□□□ -1.24
USP49-205ENST00000448078 KCNH1O95259 989 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 HIBADHP31937 336 aaKnown RBP7.28□□□□□ -1.24
USP49-205ENST00000448078 GNAI1P63096 354 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 SNX17Q15036 470 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 MFSD14BQ5SR56 506 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 FKBP1CQ5VVH2 108 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 HLA-DQA1Q5Y7H0 255 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 POMZP3Q6PJE2 187 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 CYP2R1Q6VVX0 501 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 Q7L0L9 218 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 FAM83AQ86UY5 434 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 FAM178BQ8IXR5 827 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.28□□□□□ -1.24
USP49-205ENST00000448078 SMCR8Q8TEV9 937 aaPredicted RBP7.28□□□□□ -1.24
USP49-205ENST00000448078 LINC01599Q8WXQ3 324 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 KLHL6Q8WZ60 621 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 TEKT1Q969V4 418 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 FAM84AQ96KN4 292 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 SLC12A9Q9BXP2 914 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 TMEM39BQ9GZU3 492 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 ST7Q9NRC1 585 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 ERVK13-1Q9NX77 482 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 ZMYND8Q9ULU4 1186 aaPredicted RBP7.28□□□□□ -1.24
USP49-205ENST00000448078 CENPFP49454 3210 aa7.28□□□□□ -1.24
USP49-205ENST00000448078 LRRC37AA6NMS7 1700 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 AGRPO00253 132 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 NRDCO43847 1150 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 PLIN1O60240 522 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 IFNGR1P15260 489 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 PRKCAP17252 672 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 MAGEA10P43363 369 aaPredicted RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 FLT3LGP49771 235 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 CAP1Q01518 475 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 PRKCZQ05513 592 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 LAPTM5Q13571 262 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 WDR43Q15061 677 aaKnown RBP eCLIP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms