RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MRPL44Q9H9J2 332 aaKnown RBP21.6■■□□□ 1.05
SGCE-207ENST00000447873 OLFML3Q9NRN5 406 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 IGKV6-21A0A0C4DH24 114 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 CAVIN2O95810 425 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 ACLYP53396 1101 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 RTP1P59025 263 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 EFCAB12Q6NXP0 572 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 C11orf57Q6ZUT1 292 aaPredicted RBP21.59■■□□□ 1.05
SGCE-207ENST00000447873 KIAA0895Q8NCT3 520 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 PPP1R13LQ8WUF5 828 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 LMBR1Q8WVP7 490 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 TCP11Q8WWU5 503 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 ZNF333Q96JL9 665 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 C17orf75Q9HAS0 396 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 PCDHA2Q9Y5H9 948 aa21.59■■□□□ 1.05
SGCE-207ENST00000447873 MOXD2PA6NHM9 499 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 CABYRO75952 493 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 ARL2P36404 184 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 DNM2P50570 870 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 DMP1Q13316 513 aaPredicted RBP21.58■■□□□ 1.05
SGCE-207ENST00000447873 STIM1Q13586 685 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 IER5Q5VY09 327 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 MTHFD1LQ6UB35 978 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 LRRC71Q8N4P6 559 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 VTI1AQ96AJ9 217 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 ARMC5Q96C12 935 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 ZBTB10Q96DT7 871 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 IFT74Q96LB3 600 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 HDAC6Q9UBN7 1215 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 MAPK8IP1Q9UQF2 711 aa21.58■■□□□ 1.05
SGCE-207ENST00000447873 GNAT1P11488 350 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 PRCPP42785 496 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 PEX3P56589 373 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 NBPF20Q3BBV1 942 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 MARCH8Q5T0T0 291 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 GAS2L3Q86XJ1 694 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 GLT1D1Q96MS3 346 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 KCNG1Q9UIX4 513 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 C17orf102A2RUQ5 167 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 PPP1R3GB7ZBB8 358 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 KBTBD13C9JR72 458 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 CD44P16070 742 aaKnown RBP21.57■■□□□ 1.04
SGCE-207ENST00000447873 TMOD1P28289 359 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 ZNF165P49910 485 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 SMTNP53814 917 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 DRP2Q13474 957 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 KLHL10Q6JEL2 608 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 PSPC1Q8WXF1 523 aaKnown RBP21.57■■□□□ 1.04
SGCE-207ENST00000447873 PRDM10Q9NQV6 1147 aa21.57■■□□□ 1.04
SGCE-207ENST00000447873 CCDC169A6NNP5 214 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 GCNT3O95395 438 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 NMT1P30419 496 aaKnown RBP21.56■■□□□ 1.04
SGCE-207ENST00000447873 PPP1R2P41236 205 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 CLCN3P51790 818 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 MKRN4PQ13434 485 aaPredicted RBP21.56■■□□□ 1.04
SGCE-207ENST00000447873 PPP2R5AQ15172 486 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 CT47A1Q5JQC4 288 aaPredicted RBP21.56■■□□□ 1.04
SGCE-207ENST00000447873 ADSSL1Q8N142 457 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 SLC17A8Q8NDX2 589 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 GLIS3Q8NEA6 775 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 BSNDQ8WZ55 320 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 FGFBP2Q9BYJ0 223 aa21.56■■□□□ 1.04
SGCE-207ENST00000447873 SUCLA2Q9P2R7 463 aaPredicted RBP21.56■■□□□ 1.04
SGCE-207ENST00000447873 TRIP12Q14669 1992 aaPredicted RBP21.56■■□□□ 1.04
SGCE-207ENST00000447873 K7ENM7 598 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 DNM1LO00429 736 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 KIF20AO95235 890 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 MAPTP10636 758 aaKnown RBP21.55■■□□□ 1.04
SGCE-207ENST00000447873 GLRA2P23416 452 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 NPTX2P47972 431 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 MXD4Q14582 209 aaPredicted RBP21.55■■□□□ 1.04
SGCE-207ENST00000447873 COBLL1Q53SF7 1204 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 FAM47CQ5HY64 1035 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 L1TD1Q5T7N2 865 aaKnown RBP21.55■■□□□ 1.04
SGCE-207ENST00000447873 STXBP4Q6ZWJ1 553 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 ZNF720Q7Z2F6 126 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 MYOCDQ8IZQ8 938 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 ASAP3Q8TDY4 903 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 SPIRE2Q8WWL2 714 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 PRPF31Q8WWY3 499 aaKnown RBP21.55■■□□□ 1.04
SGCE-207ENST00000447873 FIZ1Q96SL8 496 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 KMT5AQ9NQR1 393 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 OGDHLQ9ULD0 1010 aa21.55■■□□□ 1.04
SGCE-207ENST00000447873 MBLAC1A4D2B0 266 aaPredicted RBP21.54■■□□□ 1.04
SGCE-207ENST00000447873 PSMA7O14818 248 aa21.54■■□□□ 1.04
SGCE-207ENST00000447873 CASP5P51878 434 aa21.54■■□□□ 1.04
SGCE-207ENST00000447873 GUF1Q8N442 669 aaKnown RBP21.54■■□□□ 1.04
SGCE-207ENST00000447873 LINC01465Q8N7H1 131 aa21.54■■□□□ 1.04
SGCE-207ENST00000447873 FAM200AQ8TCP9 573 aa21.54■■□□□ 1.04
SGCE-207ENST00000447873 NTPCRQ9BSD7 190 aaKnown RBP21.54■■□□□ 1.04
SGCE-207ENST00000447873 GTF2IRD1Q9UHL9 959 aa21.54■■□□□ 1.04
SGCE-207ENST00000447873 PCDHB13Q9Y5F0 798 aa21.54■■□□□ 1.04
SGCE-207ENST00000447873 A0A1W2PQ45 241 aaPredicted RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 A0A1W2PQY0 241 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 SLC16A4O15374 487 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 MYBP10242 640 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 ERCC5P28715 1186 aaPredicted RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 HOXC8P31273 242 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 ADAM17P78536 824 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms