RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 NOD1Q9Y239 953 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 SIP14410 1827 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 TRAK2O60296 914 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 VTNP04004 478 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 IDEP14735 1019 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 RTP1P59025 263 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 DPYDQ12882 1025 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 SERINC5Q86VE9 423 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 FAM126BQ8IXS8 530 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 EXOC8Q8IYI6 725 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 KIAA0319LQ8IZA0 1049 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 ASAP3Q8TDY4 903 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 DNAJB3Q8WWF6 145 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 BSNDQ8WZ55 320 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 DHX38Q92620 1227 aaKnown RBP19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 CCDC34Q96HJ3 373 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 ZNF668Q96K58 619 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 PPP1R16BQ96T49 567 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 TMEM63CQ9P1W3 806 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 SUCLA2Q9P2R7 463 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 ATP11BQ9Y2G3 1177 aa19.94■□□□□ 0.78
TRAPPC4-203ENST00000447216 SMIM35A0A1B0GVV1 85 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 RBAK-RBAKDNI3L0D1 243 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 GAS2O43903 313 aaKnown RBP19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 KLRC4O43908 158 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 TBCAO75347 108 aaKnown RBP19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 FAM13AO94988 1023 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 ARL2P36404 184 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 TLE2Q04725 743 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 SNX17Q15036 470 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 KLHL40Q2TBA0 621 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 IER5Q5VY09 327 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 CAVIN1Q6NZI2 390 aaKnown RBP19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 CNNM4Q6P4Q7 775 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 KSR1Q8IVT5 923 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 TCP11Q8WWU5 503 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 TIPINQ9BVW5 301 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 SEZ6LQ9BYH1 1024 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 AKT3Q9Y243 479 aa19.93■□□□□ 0.78
TRAPPC4-203ENST00000447216 CD4P01730 458 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 TMOD1P28289 359 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 DNM2P50570 870 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 TMEM62Q0P6H9 643 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 PSPC1Q8WXF1 523 aaKnown RBP19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 KIFAP3Q92845 792 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 MAP7D2Q96T17 732 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 PANK4Q9NVE7 773 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 HOOK1Q9UJC3 728 aaKnown RBP19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 ODF2LQ9ULJ1 636 aa19.92■□□□□ 0.78
TRAPPC4-203ENST00000447216 TLR3O15455 904 aaKnown RBP19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 RPN1P04843 607 aaKnown RBP19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 GLRA2P23416 452 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 LAMTOR4Q0VGL1 99 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 COASYQ13057 564 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 PTK7Q13308 1070 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 TRIM71Q2Q1W2 868 aaKnown RBP19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 SKOR2Q2VWA4 1001 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 CCDC183Q5T5S1 534 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 C1orf53Q5VUE5 145 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 TAF2Q6P1X5 1199 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 ANKRD33Q7Z3H0 272 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 SFR1Q86XK3 245 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 RHPN2Q8IUC4 686 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 CCDC65Q8IXS2 484 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 ELOA2Q8IYF1 753 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 HPS3Q969F9 1004 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 DRC1Q96MC2 740 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 TBC1D7Q9P0N9 293 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 PCDHA5Q9Y5H7 936 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 COL4A3BPQ9Y5P4 624 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 MROH7Q68CQ1 1323 aa19.91■□□□□ 0.78
TRAPPC4-203ENST00000447216 SCN5AQ14524 2016 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 FRMD3A2A2Y4 597 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 DCDC2CA8MYV0 355 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 MYL1P05976 194 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 PEX3P56589 373 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 CAPSQ13938 189 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 KMT5BQ4FZB7 885 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 UNC13DQ70J99 1090 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 MYCT1Q8N699 235 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 SMARCE1Q969G3 411 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 PARVGQ9HBI0 331 aa19.9■□□□□ 0.78
TRAPPC4-203ENST00000447216 CTSHP09668 335 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 PLS3P13797 630 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 THPOP40225 353 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 ZNF131P52739 623 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 FAAP100Q0VG06 881 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 HERC4Q5GLZ8 1057 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 IFT74Q96LB3 600 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 NLRP4Q96MN2 994 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 KIFC3Q9BVG8 833 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 EXOC1Q9NV70 894 aa19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 MKI67P46013 3256 aaKnown RBP19.89■□□□□ 0.77
TRAPPC4-203ENST00000447216 TANC1Q9C0D5 1861 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 PVALEFA0A1B0GWK0 134 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 LRRIQ4A6NIV6 560 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 CCDC169A6NNP5 214 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 BIN1O00499 593 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms