RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 LETM2Q2VYF4 491 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 CEP89Q96ST8 783 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 ATP6V0A4Q9HBG4 840 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 RNF216Q9NWF9 866 aaPredicted RBP20.49■□□□□ 0.87
COL9A1-205ENST00000447041 PFKFB2O60825 505 aa20.48■□□□□ 0.87
COL9A1-205ENST00000447041 NLRP7Q8WX94 980 aa20.48■□□□□ 0.87
COL9A1-205ENST00000447041 SCLT1Q96NL6 688 aa20.48■□□□□ 0.87
COL9A1-205ENST00000447041 NIFKQ9BYG3 293 aaKnown RBP20.48■□□□□ 0.87
COL9A1-205ENST00000447041 ELAC1Q9H777 363 aaKnown RBP20.48■□□□□ 0.87
COL9A1-205ENST00000447041 C11orf16Q9NQ32 467 aa20.48■□□□□ 0.87
COL9A1-205ENST00000447041 RNF19AQ9NV58 838 aa20.48■□□□□ 0.87
COL9A1-205ENST00000447041 TYW1Q9NV66 732 aaKnown RBP20.48■□□□□ 0.87
COL9A1-205ENST00000447041 CCDC194A0A1B0GVG4 234 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 FAM86C2PA6NEL3 165 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 EML1O00423 815 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 CTDNEP1O95476 244 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 DARSP14868 501 aaKnown RBP20.47■□□□□ 0.87
COL9A1-205ENST00000447041 AK2P54819 239 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 XKR3Q5GH77 459 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 COLGALT1Q8NBJ5 622 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 OXER1Q8TDS5 423 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 LRFN3Q9BTN0 628 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 CWH43Q9H720 699 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 PCDHB12Q9Y5F1 795 aa20.47■□□□□ 0.87
COL9A1-205ENST00000447041 C5orf42Q9H799 3197 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 PI4K2BG5E9Z4 385 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 MBTPS2O43462 519 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 CSDE1O75534 798 aaKnown RBP20.46■□□□□ 0.87
COL9A1-205ENST00000447041 ZSCAN20P17040 1043 aaPredicted RBP20.46■□□□□ 0.87
COL9A1-205ENST00000447041 NDUFV1P49821 464 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 ZP2Q05996 745 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 ADAM15Q13444 863 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 PIK3AP1Q6ZUJ8 805 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 NEK8Q86SG6 692 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 ZNF710Q8N1W2 664 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 PPP2R3CQ969Q6 453 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 CASD1Q96PB1 797 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 KCNMB3Q9NPA1 279 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 AAASQ9NRG9 546 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 VAV3Q9UKW4 847 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 FAM50BQ9Y247 325 aa20.46■□□□□ 0.87
COL9A1-205ENST00000447041 IGKV6-21A0A0C4DH24 114 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 FGF18O76093 207 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 LARGE1O95461 756 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 XBP1P17861 261 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 NRIP1P48552 1158 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 ANAPC15P60006 121 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 EARS2Q5JPH6 523 aaKnown RBP20.45■□□□□ 0.86
COL9A1-205ENST00000447041 TMEM31Q5JXX7 168 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 PLA2G4FQ68DD2 849 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 ANO5Q75V66 913 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 RBM23Q86U06 439 aaKnown RBP20.45■□□□□ 0.86
COL9A1-205ENST00000447041 ECHDC2Q86YB7 292 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 THNSL1Q8IYQ7 743 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 TMEM117Q9H0C3 514 aa20.45■□□□□ 0.86
COL9A1-205ENST00000447041 FAM205CA6NFA0 338 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 DDX11L8A8MPP1 907 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 CCNT1O60563 726 aaKnown RBP20.44■□□□□ 0.86
COL9A1-205ENST00000447041 GLP2RO95838 553 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 LAG3P18627 525 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 PSMC5P62195 406 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 UBE3AQ05086 875 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 PPP2R5CQ13362 524 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 SMAD4Q13485 552 aaKnown RBP20.44■□□□□ 0.86
COL9A1-205ENST00000447041 SMAD2Q15796 467 aaKnown RBP20.44■□□□□ 0.86
COL9A1-205ENST00000447041 PPP4R3AQ6IN85 833 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 LRRC55Q6ZSA7 311 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 ADHFE1Q8IWW8 467 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 EFHBQ8N7U6 833 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 NECAB1Q8N987 351 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 RNF169Q8NCN4 708 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 TLR9Q9NR96 1032 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
COL9A1-205ENST00000447041 PRKAG3Q9UGI9 489 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 CD207Q9UJ71 328 aa20.44■□□□□ 0.86
COL9A1-205ENST00000447041 A0A087WZ62 844 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 HOXA2O43364 376 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 FDPSP14324 419 aaKnown RBP20.43■□□□□ 0.86
COL9A1-205ENST00000447041 ATF7P17544 494 aaPredicted RBP20.43■□□□□ 0.86
COL9A1-205ENST00000447041 PBX3P40426 434 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 ERVFC1P60507 584 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 CLLU1OSQ5K130 101 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 LRRC43Q8N309 656 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 MSLNLQ96KJ4 702 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 FAM20AQ96MK3 541 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 FDXACB1Q9BRP7 624 aaPredicted RBP20.43■□□□□ 0.86
COL9A1-205ENST00000447041 CLEC1BQ9P126 229 aa20.43■□□□□ 0.86
COL9A1-205ENST00000447041 WRAP73Q9P2S5 460 aaPredicted RBP20.43■□□□□ 0.86
COL9A1-205ENST00000447041 BARX2Q9UMQ3 279 aaPredicted RBP20.43■□□□□ 0.86
COL9A1-205ENST00000447041 ARID2Q68CP9 1835 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 C19orf67A6NJJ6 358 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 GPR37L1O60883 481 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 MAFO75444 373 aaPredicted RBP20.42■□□□□ 0.86
COL9A1-205ENST00000447041 GCFC2P16383 781 aaKnown RBP20.42■□□□□ 0.86
COL9A1-205ENST00000447041 RBM10P98175 930 aaKnown RBP20.42■□□□□ 0.86
COL9A1-205ENST00000447041 NR5A1Q13285 461 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 ANKRD1Q15327 319 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 ME3Q16798 604 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms