RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RAD9AQ99638 391 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-204ENST00000446876 TUFT1Q9NNX1 390 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 XPNPEP1Q9NQW7 623 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 LRWD1Q9UFC0 647 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 NLRC5Q86WI3 1866 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 COL4A6Q14031 1691 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 A0A087WZ62 844 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 CDC25AP30304 524 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 CCT6AP40227 531 aaKnown RBP16.55■□□□□ 0.24
HDAC4-204ENST00000446876 RARRES1P49788 294 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 DNM2P50570 870 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 RESTQ13127 1097 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 FAM173BQ6P4H8 233 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 BRAPQ7Z569 592 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 CCDC43Q96MW1 224 aaKnown RBP16.55■□□□□ 0.24
HDAC4-204ENST00000446876 JPH2Q9BR39 696 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-204ENST00000446876 FDXACB1Q9BRP7 624 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-204ENST00000446876 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
HDAC4-204ENST00000446876 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 LAD1O00515 517 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 USO1O60763 962 aaKnown RBP16.54■□□□□ 0.24
HDAC4-204ENST00000446876 DARSP14868 501 aaKnown RBP16.54■□□□□ 0.24
HDAC4-204ENST00000446876 EIF4BP23588 611 aaKnown RBP16.54■□□□□ 0.24
HDAC4-204ENST00000446876 RPA1P27694 616 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 PRPHP41219 470 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 HTRA4P83105 476 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-204ENST00000446876 DTHD1Q6ZMT9 781 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 IGSF22Q8N9C0 903 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 SNX29Q8TEQ0 813 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
HDAC4-204ENST00000446876 YME1L1Q96TA2 773 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 MTRQ99707 1265 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 ADAM2Q99965 735 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 FTHL17Q9BXU8 183 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-204ENST00000446876 MTUS1Q9ULD2 1270 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 PPME1Q9Y570 386 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 KIAA1671Q9BY89 1806 aa16.54■□□□□ 0.24
HDAC4-204ENST00000446876 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 LINC01553A4QN01 128 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 VWA3AA6NCI4 1184 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 RFXAPO00287 272 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 GPR182O15218 404 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 HAUS3Q68CZ6 603 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 PSPC1Q8WXF1 523 aaKnown RBP16.53■□□□□ 0.24
HDAC4-204ENST00000446876 ARNTL2Q8WYA1 636 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 GCOM2Q9BZD3 368 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-204ENST00000446876 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 STXBP5LQ9Y2K9 1186 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 INSL6Q9Y581 213 aa16.53■□□□□ 0.24
HDAC4-204ENST00000446876 DENND3A2RUS2 1198 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 STX6O43752 255 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 SRGAP2CP0DJJ0 459 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 FOSL2P15408 326 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 GATMP50440 423 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 LAMTOR4Q0VGL1 99 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 ADGRE1Q14246 886 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 PDIA5Q14554 519 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 DSC3Q14574 896 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.24
HDAC4-204ENST00000446876 MAEAQ7L5Y9 396 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 ZNF410Q86VK4 478 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 ASAP3Q8TDY4 903 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 NACC1Q96RE7 527 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 MMTAG2Q9BU76 263 aaKnown RBP16.52■□□□□ 0.24
HDAC4-204ENST00000446876 RAB34Q9BZG1 259 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 DDX19AQ9NUU7 478 aaKnown RBP16.52■□□□□ 0.24
HDAC4-204ENST00000446876 KIAA1024Q9UPX6 916 aa16.52■□□□□ 0.24
HDAC4-204ENST00000446876 FNDC1Q4ZHG4 1894 aaPredicted RBP16.52■□□□□ 0.23
HDAC4-204ENST00000446876 RALGAPA2Q2PPJ7 1873 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 DGAT1O75907 488 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 GRIN1Q05586 938 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 ODR4Q5SWX8 454 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 FOXD4L5Q5VV16 416 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 NPAS4Q8IUM7 802 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 EXOC8Q8IYI6 725 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 C17orf80Q9BSJ5 609 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 IFT122Q9HBG6 1241 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 DBR1Q9UK59 544 aaKnown RBP16.51■□□□□ 0.23
HDAC4-204ENST00000446876 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
HDAC4-204ENST00000446876 ARHGEF35A5YM69 484 aa16.5■□□□□ 0.23
HDAC4-204ENST00000446876 C9IYK1 514 aa16.5■□□□□ 0.23
HDAC4-204ENST00000446876 E9PMD0 336 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms