RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 USP49Q70CQ1 688 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 ZNF365Q70YC5 407 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 KCNK18Q7Z418 384 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 SPATA32Q96LK8 384 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 PLIN2Q99541 437 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.84
PHTF1-207ENST00000446739 COLQQ9Y215 455 aaPredicted RBP20.27■□□□□ 0.84
PHTF1-207ENST00000446739 ASAP2O43150 1006 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 GHRP10912 638 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 CYP11B2P19099 503 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 PLCG1P19174 1290 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 GPC3P51654 580 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 NLRP11P59045 1033 aaKnown RBP20.26■□□□□ 0.83
PHTF1-207ENST00000446739 LPIN1Q14693 890 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 PLEKHG4Q58EX7 1191 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 CNKSR3Q6P9H4 555 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 TDHQ8IZJ6 230 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 LEO1Q8WVC0 666 aaPredicted RBP20.26■□□□□ 0.83
PHTF1-207ENST00000446739 SEPT8Q92599 483 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 TMEM143Q96AN5 459 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 MTIF3Q9H2K0 278 aaKnown RBP20.26■□□□□ 0.83
PHTF1-207ENST00000446739 ADAMTS10Q9H324 1103 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 PCDHA7Q9UN72 937 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 GINS2Q9Y248 185 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 COL4A3BPQ9Y5P4 624 aa20.26■□□□□ 0.83
PHTF1-207ENST00000446739 MXD4Q14582 209 aaPredicted RBP20.25■□□□□ 0.83
PHTF1-207ENST00000446739 SHHQ15465 462 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 ODR4Q5SWX8 454 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 C9orf50Q5SZB4 431 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
PHTF1-207ENST00000446739 ZNF410Q86VK4 478 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 RHPN2Q8IUC4 686 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 DBF4BQ8NFT6 615 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 NLRP7Q8WX94 980 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 HERVK_113Q902F9 699 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 APBB2Q92870 758 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 CHAMP1Q96JM3 812 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 SCLT1Q96NL6 688 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 PPP1R16BQ96T49 567 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 OSMRQ99650 979 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 IFIH1Q9BYX4 1025 aaKnown RBP20.25■□□□□ 0.83
PHTF1-207ENST00000446739 CDHR5Q9HBB8 845 aa20.25■□□□□ 0.83
PHTF1-207ENST00000446739 BAIAP3O94812 1187 aa20.24■□□□□ 0.83
PHTF1-207ENST00000446739 PLA2G4BP0C869 781 aa20.24■□□□□ 0.83
PHTF1-207ENST00000446739 ARL2P36404 184 aa20.24■□□□□ 0.83
PHTF1-207ENST00000446739 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
PHTF1-207ENST00000446739 SYT2Q8N9I0 419 aaPredicted RBP20.24■□□□□ 0.83
PHTF1-207ENST00000446739 PRPF31Q8WWY3 499 aaKnown RBP20.24■□□□□ 0.83
PHTF1-207ENST00000446739 RNPC3Q96LT9 517 aaKnown RBP20.24■□□□□ 0.83
PHTF1-207ENST00000446739 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
PHTF1-207ENST00000446739 OSBPL7Q9BZF2 842 aa20.24■□□□□ 0.83
PHTF1-207ENST00000446739 STK17AQ9UEE5 414 aa20.24■□□□□ 0.83
PHTF1-207ENST00000446739 EFCAB14O75071 495 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 SSBP05455 408 aaKnown RBP eCLIP20.23■□□□□ 0.83
PHTF1-207ENST00000446739 SLC12A3P55017 1021 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 LAMTOR4Q0VGL1 99 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 IKBKEQ14164 716 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 RRAGBQ5VZM2 374 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 RINT1Q6NUQ1 792 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 SHC4Q6S5L8 630 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 CCDC73Q6ZRK6 1079 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 OTOP2Q7RTS6 562 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 RAD54LQ92698 747 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 NLRP4Q96MN2 994 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 TIPINQ9BVW5 301 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 GCOM2Q9BZD3 368 aaPredicted RBP20.23■□□□□ 0.83
PHTF1-207ENST00000446739 INO80BQ9C086 356 aaPredicted RBP20.23■□□□□ 0.83
PHTF1-207ENST00000446739 POLR3FQ9H1D9 316 aaPredicted RBP20.23■□□□□ 0.83
PHTF1-207ENST00000446739 AGO3Q9H9G7 860 aaKnown RBP20.23■□□□□ 0.83
PHTF1-207ENST00000446739 BLOC1S4Q9NUP1 217 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
PHTF1-207ENST00000446739 PTPRSQ13332 1948 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 A0A087WZ62 844 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 ABHD14A-ACY1A0A1B0GW23 586 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 RPS6KA5O75582 802 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 DARSP14868 501 aaKnown RBP20.22■□□□□ 0.83
PHTF1-207ENST00000446739 EIF4BP23588 611 aaKnown RBP20.22■□□□□ 0.83
PHTF1-207ENST00000446739 CD52P31358 61 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 PAK2Q13177 524 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 TFDP1Q14186 410 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 FAM102BQ5T8I3 360 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 RASIP1Q5U651 963 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 C1orf186Q6ZWK4 172 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 KSR1Q8IVT5 923 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 TMEM40Q8WWA1 233 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 LARP4BQ92615 738 aaKnown RBP20.22■□□□□ 0.83
PHTF1-207ENST00000446739 KIFAP3Q92845 792 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 ZNF668Q96K58 619 aaPredicted RBP20.22■□□□□ 0.83
PHTF1-207ENST00000446739 FDXACB1Q9BRP7 624 aaPredicted RBP20.22■□□□□ 0.83
PHTF1-207ENST00000446739 PADI3Q9ULW8 664 aa20.22■□□□□ 0.83
PHTF1-207ENST00000446739 NOC2LQ9Y3T9 749 aaKnown RBP20.22■□□□□ 0.83
PHTF1-207ENST00000446739 TTC3P53804 2025 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 GPR182O15218 404 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 GUCY2CP25092 1073 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 POU5F1BQ06416 359 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 RESP18Q5W5W9 173 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 RNF149Q8NC42 400 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 ASAP3Q8TDY4 903 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms