RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 PCDHB6Q9Y5E3 794 aa21.13■□□□□ 0.97
LRRC42-204ENST00000444987 LINC01553A4QN01 128 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 UPP2O95045 317 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 POU3F3P20264 500 aaPredicted RBP21.12■□□□□ 0.97
LRRC42-204ENST00000444987 ERVK-21P61565 698 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 BRAPQ7Z569 592 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 RTN4RL1Q86UN2 441 aaPredicted RBP21.12■□□□□ 0.97
LRRC42-204ENST00000444987 CRIPAKQ8N1N5 446 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 NLRP7Q8WX94 980 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 PSPC1Q8WXF1 523 aaKnown RBP21.12■□□□□ 0.97
LRRC42-204ENST00000444987 LINC01599Q8WXQ3 324 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 SCLT1Q96NL6 688 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 SH2D3AQ9BRG2 576 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 TMX1Q9H3N1 280 aa21.12■□□□□ 0.97
LRRC42-204ENST00000444987 DENND3A2RUS2 1198 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 LCHNA4D1U4 455 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 DGAT1O75907 488 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 SPATA31C1P0DKV0 1188 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 SARSP49591 514 aaKnown RBP21.11■□□□□ 0.97
LRRC42-204ENST00000444987 DRP2Q13474 957 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 SLC24A5Q71RS6 500 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 CATSPER3Q86XQ3 398 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 IGSF22Q8N9C0 903 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 CCDC43Q96MW1 224 aaKnown RBP21.11■□□□□ 0.97
LRRC42-204ENST00000444987 NACC1Q96RE7 527 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 PPP1R16BQ96T49 567 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 MTRQ99707 1265 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 DBR1Q9UK59 544 aaKnown RBP21.11■□□□□ 0.97
LRRC42-204ENST00000444987 RALGAPA2Q2PPJ7 1873 aa21.11■□□□□ 0.97
LRRC42-204ENST00000444987 DGKIO75912 1065 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 RARRES1P49788 294 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 NBR1Q14596 966 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 EMC2Q15006 297 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 RHPN2Q8IUC4 686 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 ZNF579Q8NAF0 562 aaKnown RBP21.1■□□□□ 0.97
LRRC42-204ENST00000444987 ZNF689Q96CS4 500 aaPredicted RBP21.1■□□□□ 0.97
LRRC42-204ENST00000444987 ADAM2Q99965 735 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 ELAC1Q9H777 363 aaKnown RBP21.1■□□□□ 0.97
LRRC42-204ENST00000444987 RC3H2Q9HBD1 1191 aaKnown RBP21.1■□□□□ 0.97
LRRC42-204ENST00000444987 CHST12Q9NRB3 414 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 LRWD1Q9UFC0 647 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 RWDD3Q9Y3V2 267 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 COL4A3BPQ9Y5P4 624 aa21.1■□□□□ 0.97
LRRC42-204ENST00000444987 ARHGEF15O94989 841 aa21.09■□□□□ 0.97
LRRC42-204ENST00000444987 ZSCAN20P17040 1043 aaPredicted RBP21.09■□□□□ 0.97
LRRC42-204ENST00000444987 SFPQP23246 707 aaKnown RBP eCLIP21.09■□□□□ 0.97
LRRC42-204ENST00000444987 FAM189BP81408 668 aa21.09■□□□□ 0.97
LRRC42-204ENST00000444987 ATP2C1P98194 919 aaPredicted RBP21.09■□□□□ 0.97
LRRC42-204ENST00000444987 POU5F1BQ06416 359 aa21.09■□□□□ 0.97
LRRC42-204ENST00000444987 DSC3Q14574 896 aa21.09■□□□□ 0.97
LRRC42-204ENST00000444987 MXD4Q14582 209 aaPredicted RBP21.09■□□□□ 0.97
LRRC42-204ENST00000444987 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
LRRC42-204ENST00000444987 DTHD1Q6ZMT9 781 aa21.09■□□□□ 0.97
LRRC42-204ENST00000444987 MAFAQ8NHW3 353 aaPredicted RBP21.09■□□□□ 0.97
LRRC42-204ENST00000444987 LRFN2Q9ULH4 789 aa21.09■□□□□ 0.97
LRRC42-204ENST00000444987 ADGRA3Q8IWK6 1321 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 A0A087WZ62 844 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 C9IYK1 514 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 ZBTB39O15060 712 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 MED24O75448 989 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 BMP15O95972 392 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 PCBP1Q15365 356 aaKnown RBP eCLIP21.08■□□□□ 0.971e-6■■□□□ 14.4
LRRC42-204ENST00000444987 SRGAP1Q7Z6B7 1085 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 CMTR2Q8IYT2 770 aaKnown RBP21.08■□□□□ 0.97
LRRC42-204ENST00000444987 FIBCD1Q8N539 461 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 KCTD17Q8N5Z5 321 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 PRPF31Q8WWY3 499 aaKnown RBP21.08■□□□□ 0.97
LRRC42-204ENST00000444987 ARNTL2Q8WYA1 636 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 FDXACB1Q9BRP7 624 aaPredicted RBP21.08■□□□□ 0.97
LRRC42-204ENST00000444987 ATP6V0A4Q9HBG4 840 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 DACT1Q9NYF0 836 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 LMCD1Q9NZU5 365 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 PCDHB7Q9Y5E2 793 aa21.08■□□□□ 0.97
LRRC42-204ENST00000444987 MGEA5O60502 916 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 PDIA4P13667 645 aaKnown RBP21.07■□□□□ 0.96
LRRC42-204ENST00000444987 ADGRE1Q14246 886 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 FERMT3Q86UX7 667 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 PIGOQ8TEQ8 1089 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 TRAIPQ9BWF2 469 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 TMEM161AQ9NX61 479 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 NLRC5Q86WI3 1866 aa21.07■□□□□ 0.96
LRRC42-204ENST00000444987 GTPBP6O43824 516 aaPredicted RBP21.06■□□□□ 0.96
LRRC42-204ENST00000444987 LAMTOR4Q0VGL1 99 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 TFDP1Q14186 410 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 MCPH1Q8NEM0 835 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 RSPH1Q8WYR4 309 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 CLP1Q92989 425 aaKnown RBP21.06■□□□□ 0.96
LRRC42-204ENST00000444987 TMEM143Q96AN5 459 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 NLRP4Q96MN2 994 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 IFT122Q9HBG6 1241 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 XPNPEP1Q9NQW7 623 aa21.06■□□□□ 0.96
LRRC42-204ENST00000444987 COL4A4P53420 1690 aaPredicted RBP21.05■□□□□ 0.96
LRRC42-204ENST00000444987 CHD9Q3L8U1 2897 aa21.05■□□□□ 0.96
LRRC42-204ENST00000444987 VPS37CA5D8V6 355 aaPredicted RBP21.05■□□□□ 0.96
LRRC42-204ENST00000444987 HOXA2O43364 376 aa21.05■□□□□ 0.96
LRRC42-204ENST00000444987 RB1P06400 928 aa21.05■□□□□ 0.96
LRRC42-204ENST00000444987 IGFBP4P22692 258 aa21.05■□□□□ 0.96
LRRC42-204ENST00000444987 CCT6AP40227 531 aaKnown RBP21.05■□□□□ 0.96
LRRC42-204ENST00000444987 BTG3Q14201 252 aaPredicted RBP21.05■□□□□ 0.96
LRRC42-204ENST00000444987 KRT79Q5XKE5 535 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms