RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 XRCC6P12956 609 aaKnown RBP eCLIP20.81■□□□□ 0.92
CCDC188-202ENST00000444532 DARSP14868 501 aaKnown RBP20.81■□□□□ 0.92
CCDC188-202ENST00000444532 LARP1BQ659C4 914 aaKnown RBP20.81■□□□□ 0.92
CCDC188-202ENST00000444532 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 NPAS4Q8IUM7 802 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 ERMNQ8TAM6 284 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 SAMD11Q96NU1 681 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 ADAM2Q99965 735 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 GCOM2Q9BZD3 368 aaPredicted RBP20.81■□□□□ 0.92
CCDC188-202ENST00000444532 TUFT1Q9NNX1 390 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 CDH23Q9H251 3354 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 EPOPA6NHQ4 379 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 LAD1O00515 517 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 MGEA5O60502 916 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 DGKIO75912 1065 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 SARSP49591 514 aaKnown RBP20.8■□□□□ 0.92
CCDC188-202ENST00000444532 RILPL1Q5EBL4 403 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 SLC24A5Q71RS6 500 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 SPRED2Q7Z698 418 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 RHPN2Q8IUC4 686 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 TCP11Q8WWU5 503 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 ZNF689Q96CS4 500 aaPredicted RBP20.8■□□□□ 0.92
CCDC188-202ENST00000444532 POLR3CQ9BUI4 534 aaPredicted RBP20.8■□□□□ 0.92
CCDC188-202ENST00000444532 INO80BQ9C086 356 aaPredicted RBP20.8■□□□□ 0.92
CCDC188-202ENST00000444532 PCDHB6Q9Y5E3 794 aa20.8■□□□□ 0.92
CCDC188-202ENST00000444532 RFXAPO00287 272 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 GTPBP6O43824 516 aaPredicted RBP20.79■□□□□ 0.92
CCDC188-202ENST00000444532 SPATA31C1P0DKV0 1188 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 FXR2P51116 673 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCDC188-202ENST00000444532 PTGDRQ13258 359 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 PDIA5Q14554 519 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 DSC3Q14574 896 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 NBR1Q14596 966 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 FIBCD1Q8N539 461 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 SLC17A8Q8NDX2 589 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 ZNF668Q96K58 619 aaPredicted RBP20.79■□□□□ 0.92
CCDC188-202ENST00000444532 RC3H2Q9HBD1 1191 aaKnown RBP20.79■□□□□ 0.92
CCDC188-202ENST00000444532 LRFN2Q9ULH4 789 aa20.79■□□□□ 0.92
CCDC188-202ENST00000444532 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 RALGAPA2Q2PPJ7 1873 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 A0A087WZ62 844 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 C9IYK1 514 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 ASAP2O43150 1006 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 ZSCAN20P17040 1043 aaPredicted RBP20.78■□□□□ 0.92
CCDC188-202ENST00000444532 MUTP22033 750 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 RPA1P27694 616 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 FAM189BP81408 668 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 EMC2Q15006 297 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 CATSPER3Q86XQ3 398 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 PSPC1Q8WXF1 523 aaKnown RBP20.78■□□□□ 0.92
CCDC188-202ENST00000444532 CCDC43Q96MW1 224 aaKnown RBP20.78■□□□□ 0.92
CCDC188-202ENST00000444532 FDXACB1Q9BRP7 624 aaPredicted RBP20.78■□□□□ 0.92
CCDC188-202ENST00000444532 C17orf80Q9BSJ5 609 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.78■□□□□ 0.92
CCDC188-202ENST00000444532 MTUS1Q9ULD2 1270 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 PCDHB7Q9Y5E2 793 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 COL4A3BPQ9Y5P4 624 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 STK24Q9Y6E0 443 aa20.78■□□□□ 0.92
CCDC188-202ENST00000444532 NLRC5Q86WI3 1866 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 DGAT1O75907 488 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 PDCP20941 246 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 PRPHP41219 470 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 GRB10Q13322 594 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 BTG3Q14201 252 aaPredicted RBP20.77■□□□□ 0.92
CCDC188-202ENST00000444532 FBXO22Q8NEZ5 403 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 PIGOQ8TEQ8 1089 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 PRPF31Q8WWY3 499 aaKnown RBP20.77■□□□□ 0.92
CCDC188-202ENST00000444532 TMEM143Q96AN5 459 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 NACC1Q96RE7 527 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 MTRQ99707 1265 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 RAB34Q9BZG1 259 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 ELAC1Q9H777 363 aaKnown RBP20.77■□□□□ 0.92
CCDC188-202ENST00000444532 LMCD1Q9NZU5 365 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 MTCH2Q9Y6C9 303 aa20.77■□□□□ 0.92
CCDC188-202ENST00000444532 LPXNO60711 386 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 MED24O75448 989 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 SFPQP23246 707 aaKnown RBP eCLIP20.76■□□□□ 0.91
CCDC188-202ENST00000444532 RARRES1P49788 294 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 EPC2Q52LR7 807 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 HAUS3Q68CZ6 603 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 KSR1Q8IVT5 923 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 TMEM192Q8IY95 271 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 CMTR2Q8IYT2 770 aaKnown RBP20.76■□□□□ 0.91
CCDC188-202ENST00000444532 IGSF22Q8N9C0 903 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 INTS4Q96HW7 963 aaKnown RBP20.76■□□□□ 0.91
CCDC188-202ENST00000444532 NLRP4Q96MN2 994 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 IFT122Q9HBG6 1241 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 CHST12Q9NRB3 414 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 LRWD1Q9UFC0 647 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 DBR1Q9UK59 544 aaKnown RBP20.76■□□□□ 0.91
CCDC188-202ENST00000444532 RWDD3Q9Y3V2 267 aa20.76■□□□□ 0.91
CCDC188-202ENST00000444532 COL4A4P53420 1690 aaPredicted RBP20.76■□□□□ 0.91
CCDC188-202ENST00000444532 LAMTOR4Q0VGL1 99 aa20.75■□□□□ 0.91
CCDC188-202ENST00000444532 MXD4Q14582 209 aaPredicted RBP20.75■□□□□ 0.91
CCDC188-202ENST00000444532 FERMT3Q86UX7 667 aa20.75■□□□□ 0.91
CCDC188-202ENST00000444532 CLP1Q92989 425 aaKnown RBP20.75■□□□□ 0.91
CCDC188-202ENST00000444532 ATP6V0A4Q9HBG4 840 aa20.75■□□□□ 0.91
CCDC188-202ENST00000444532 XPNPEP1Q9NQW7 623 aa20.75■□□□□ 0.91
CCDC188-202ENST00000444532 TMEM161AQ9NX61 479 aa20.75■□□□□ 0.91
CCDC188-202ENST00000444532 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms