RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 XKR9Q5GH70 373 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 IGSF22Q8N9C0 903 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 PIGOQ8TEQ8 1089 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 FTHL17Q9BXU8 183 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 SUCLA2Q9P2R7 463 aaPredicted RBP24.4■■□□□ 1.5
TRAF4-205ENST00000444415 PPME1Q9Y570 386 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 INSL6Q9Y581 213 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 PRRC2BQ5JSZ5 2229 aaKnown RBP24.4■■□□□ 1.5
TRAF4-205ENST00000444415 KIAA1671Q9BY89 1806 aa24.4■■□□□ 1.5
TRAF4-205ENST00000444415 RFXAPO00287 272 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 LINC00271P0C7V0 271 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 DARSP14868 501 aaKnown RBP24.39■■□□□ 1.5
TRAF4-205ENST00000444415 FGFR4P22455 802 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 EIF4BP23588 611 aaKnown RBP24.39■■□□□ 1.5
TRAF4-205ENST00000444415 RARRES1P49788 294 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 DSC3Q14574 896 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 EMC2Q15006 297 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 FNDC1Q4ZHG4 1894 aaPredicted RBP24.39■■□□□ 1.5
TRAF4-205ENST00000444415 POTEGQ6S5H5 508 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 TMEM143Q96AN5 459 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 POLR3CQ9BUI4 534 aaPredicted RBP24.39■■□□□ 1.5
TRAF4-205ENST00000444415 FOXD4L1Q9NU39 408 aa24.39■■□□□ 1.5
TRAF4-205ENST00000444415 A0A087WZ62 844 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 POLGP54098 1239 aaPredicted RBP24.38■■□□□ 1.49
TRAF4-205ENST00000444415 ATP2C1P98194 919 aaPredicted RBP24.38■■□□□ 1.49
TRAF4-205ENST00000444415 FDXACB1Q9BRP7 624 aaPredicted RBP24.38■■□□□ 1.49
TRAF4-205ENST00000444415 TUFT1Q9NNX1 390 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 ANKEF1Q9NU02 776 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 RALGAPA2Q2PPJ7 1873 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 FOSL2P15408 326 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 SYT1P21579 422 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 RPA1P27694 616 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 RFC5P40937 340 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 OTUD6AQ7L8S5 288 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 RHPN2Q8IUC4 686 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 NLRP7Q8WX94 980 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 SLC7A3Q8WY07 619 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 ZNF689Q96CS4 500 aaPredicted RBP24.38■■□□□ 1.49
TRAF4-205ENST00000444415 IFT122Q9HBG6 1241 aa24.38■■□□□ 1.49
TRAF4-205ENST00000444415 PP2D1A8MPX8 630 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 GPR182O15218 404 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 PRPHP41219 470 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 FERMT3Q86UX7 667 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 ZNF710Q8N1W2 664 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 YME1L1Q96TA2 773 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 ADAM2Q99965 735 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 RGS18Q9NS28 235 aa24.37■■□□□ 1.49
TRAF4-205ENST00000444415 C9IYK1 514 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 LAD1O00515 517 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 LPXNO60711 386 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 DGKIO75912 1065 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 PRPF31Q8WWY3 499 aaKnown RBP24.36■■□□□ 1.49
TRAF4-205ENST00000444415 ARNTL2Q8WYA1 636 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 JPH2Q9BR39 696 aaPredicted RBP24.36■■□□□ 1.49
TRAF4-205ENST00000444415 C17orf80Q9BSJ5 609 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 MMTAG2Q9BU76 263 aaKnown RBP24.36■■□□□ 1.49
TRAF4-205ENST00000444415 COL4A3BPQ9Y5P4 624 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 ATG2AQ2TAZ0 1938 aa24.36■■□□□ 1.49
TRAF4-205ENST00000444415 VPS37CA5D8V6 355 aaPredicted RBP24.35■■□□□ 1.49
TRAF4-205ENST00000444415 CDC25AP30304 524 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 GATMP50440 423 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 DNM2P50570 870 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 ERVK-21P61565 698 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 PDIA5Q14554 519 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 ZNF410Q86VK4 478 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 NLRP4Q96MN2 994 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 MINDY3Q9H8M7 445 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 LRWD1Q9UFC0 647 aa24.35■■□□□ 1.49
TRAF4-205ENST00000444415 XRCC6P12956 609 aaKnown RBP eCLIP24.34■■□□□ 1.493e-10■■□□□ 12.6
TRAF4-205ENST00000444415 SARSP49591 514 aaKnown RBP24.34■■□□□ 1.49
TRAF4-205ENST00000444415 LAMTOR4Q0VGL1 99 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 RESTQ13127 1097 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 NPAS4Q8IUM7 802 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 MTRQ99707 1265 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 MTUS1Q9ULD2 1270 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 MTMR6Q9Y217 621 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 ADGRA3Q8IWK6 1321 aa24.34■■□□□ 1.49
TRAF4-205ENST00000444415 GAS2O43903 313 aaKnown RBP24.33■■□□□ 1.49
TRAF4-205ENST00000444415 BRAPQ7Z569 592 aa24.33■■□□□ 1.49
TRAF4-205ENST00000444415 MAFAQ8NHW3 353 aaPredicted RBP24.33■■□□□ 1.49
TRAF4-205ENST00000444415 ASAP3Q8TDY4 903 aa24.33■■□□□ 1.49
TRAF4-205ENST00000444415 PSPC1Q8WXF1 523 aaKnown RBP24.33■■□□□ 1.49
TRAF4-205ENST00000444415 SCLT1Q96NL6 688 aa24.33■■□□□ 1.49
TRAF4-205ENST00000444415 TGS1Q96RS0 853 aaKnown RBP24.33■■□□□ 1.49
TRAF4-205ENST00000444415 GCOM2Q9BZD3 368 aaPredicted RBP24.33■■□□□ 1.49
TRAF4-205ENST00000444415 DBR1Q9UK59 544 aaKnown RBP24.33■■□□□ 1.49
TRAF4-205ENST00000444415 MYH15Q9Y2K3 1946 aa24.33■■□□□ 1.49
TRAF4-205ENST00000444415 DGAT1O75907 488 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 PDCP20941 246 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 FAM189BP81408 668 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 FAM173BQ6P4H8 233 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 SLC24A5Q71RS6 500 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 ERMNQ8TAM6 284 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 GDPD5Q8WTR4 605 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 ATP6V0A4Q9HBG4 840 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 GPRC5CQ9NQ84 441 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 DENND3A2RUS2 1198 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 USO1O60763 962 aaKnown RBP24.32■■□□□ 1.48
TRAF4-205ENST00000444415 ARL2P36404 184 aa24.32■■□□□ 1.48
TRAF4-205ENST00000444415 CCT6AP40227 531 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms