RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ZNF747Q9BV97 191 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 NELFAQ9H3P2 528 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 TOMM22Q9NS69 142 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 FANCLQ9NW38 375 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 VWA7Q9Y334 891 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 RBM8AQ9Y5S9 174 aaKnown RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 SLC26A4O43511 780 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 GAS7O60861 476 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 TACR2P21452 398 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 STAT3P40763 770 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 HGFACQ04756 655 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 FOXL1Q12952 345 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 TIGD7Q6NT04 549 aaPredicted RBP6.6□□□□□ -1.35
VPS50-206ENST00000443443 C16orf86Q6ZW13 317 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
VPS50-206ENST00000443443 NXPE1Q8N323 547 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 SLC16A11Q8NCK7 471 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 RPGRQ92834 1020 aaKnown RBP6.6□□□□□ -1.35
VPS50-206ENST00000443443 EDAQ92838 391 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 GFM2Q969S9 779 aaKnown RBP6.6□□□□□ -1.35
VPS50-206ENST00000443443 RPL10LQ96L21 214 aaKnown RBP6.6□□□□□ -1.35
VPS50-206ENST00000443443 C16orf92Q96LL3 132 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 INTS7Q9NVH2 962 aaKnown RBP6.6□□□□□ -1.35
VPS50-206ENST00000443443 OXSMQ9NWU1 459 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 SLC30A1Q9Y6M5 507 aa6.6□□□□□ -1.35
VPS50-206ENST00000443443 AKAP8O43823 692 aaKnown RBP6.59□□□□□ -1.35
VPS50-206ENST00000443443 HIBADHP31937 336 aaKnown RBP6.59□□□□□ -1.35
VPS50-206ENST00000443443 GDF5P43026 501 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 ADCY1Q08828 1119 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 Q6ZSN1 163 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 D2HGDHQ8N465 521 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 OR5AN1Q8NGI8 311 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 EXTL1Q92935 676 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 CSRNP2Q9H175 543 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 KCMF1Q9P0J7 381 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 SRRDQ9UH36 339 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 SYNPO2Q9UMS6 1093 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 SPO11Q9Y5K1 396 aa6.59□□□□□ -1.35
VPS50-206ENST00000443443 A0A1W2PRX2 142 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 MAFO75444 373 aaPredicted RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 ATP2A2P16615 1042 aaKnown RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 BCAR1P56945 870 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 ADCY2Q08462 1091 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 DUSP8Q13202 625 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 SART3Q15020 963 aaKnown RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 EPHA7Q15375 998 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 USP51Q70EK9 711 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 LRRTM3Q86VH5 581 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 ZNF808Q8N4W9 903 aaPredicted RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 C7orf31Q8N865 590 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 RTF1Q92541 710 aaKnown RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 LPPQ93052 612 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 DYDC2Q96IM9 177 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 AGO3Q9H9G7 860 aaKnown RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 H2AFY2Q9P0M6 372 aaPredicted RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
VPS50-206ENST00000443443 HS3ST3A1Q9Y663 406 aa6.58□□□□□ -1.36
VPS50-206ENST00000443443 C2orf78A6NCI8 922 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 MAFGO15525 162 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 DAPK3O43293 454 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 FZD7O75084 574 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 ADCY7P51828 1080 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 BPIFB4P59827 614 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 RIN1Q13671 783 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 TKFCQ3LXA3 575 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 CRIP3Q6Q6R5 217 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 MAMDC4Q6UXC1 1216 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 PHYKPLQ8IUZ5 450 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 PASD1Q8IV76 773 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 C1orf210Q8IVY1 113 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 ANKRD53Q8N9V6 530 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 RABGGTAQ92696 567 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 WDR92Q96MX6 357 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 SLC6A15Q9H2J7 730 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 POFUT1Q9H488 388 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 MSL2Q9HCI7 577 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 TLR9Q9NR96 1032 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 THG1LQ9NWX6 298 aaKnown RBP6.57□□□□□ -1.36
VPS50-206ENST00000443443 DNAI1Q9UI46 699 aa6.57□□□□□ -1.36
VPS50-206ENST00000443443 MRPL42Q9Y6G3 142 aaKnown RBP6.57□□□□□ -1.36
VPS50-206ENST00000443443 CDC45O75419 566 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 PRPF6O94906 941 aaKnown RBP6.56□□□□□ -1.36
VPS50-206ENST00000443443 F2P00734 622 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 SCNN1BP51168 640 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 FOXE3Q13461 319 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 TCIRG1Q13488 830 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 KRT40Q6A162 431 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 ESRP1Q6NXG1 681 aaKnown RBP6.56□□□□□ -1.36
VPS50-206ENST00000443443 RNF207Q6ZRF8 634 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 ADGRE4PQ86SQ3 457 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 ZFPM1Q8IX07 1006 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 NIM1KQ8IY84 436 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 ZZZ3Q8IYH5 903 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 CHTF18Q8WVB6 975 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 NINJ1Q92982 152 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 SLC7A6OSQ96CW6 309 aaPredicted RBP6.56□□□□□ -1.36
VPS50-206ENST00000443443 MYL10Q9BUA6 226 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 SCAND2PQ9GZW5 306 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms