RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 IRAK3Q9Y616 596 aa15.89■□□□□ 0.13
LINC00642-202ENST00000442515 PLEKHA8P1O95397 391 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 CCNE2O96020 404 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 SP9P0CG40 484 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 CTSAP10619 480 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 ZSCAN20P17040 1043 aaPredicted RBP15.88■□□□□ 0.13
LINC00642-202ENST00000442515 ALDH7A1P49419 539 aaKnown RBP15.88■□□□□ 0.13
LINC00642-202ENST00000442515 TBC1D8BQ0IIM8 1120 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 GIT2Q14161 759 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 ZNF484Q5JVG2 852 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 SPECC1Q5M775 1068 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 FAM160B1Q5W0V3 765 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 CCDC60Q8IWA6 550 aaPredicted RBP15.88■□□□□ 0.13
LINC00642-202ENST00000442515 CTCFLQ8NI51 663 aaPredicted RBP15.88■□□□□ 0.13
LINC00642-202ENST00000442515 MRPL9Q9BYD2 267 aaKnown RBP15.88■□□□□ 0.13
LINC00642-202ENST00000442515 TBC1D17Q9HA65 648 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 AGO4Q9HCK5 861 aaKnown RBP15.88■□□□□ 0.13
LINC00642-202ENST00000442515 IGSF9Q9P2J2 1179 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 WNT16Q9UBV4 365 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 CA14Q9ULX7 337 aa15.88■□□□□ 0.13
LINC00642-202ENST00000442515 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 DDX39AO00148 427 aaKnown RBP15.87■□□□□ 0.13
LINC00642-202ENST00000442515 N4BP1O75113 896 aaKnown RBP15.87■□□□□ 0.13
LINC00642-202ENST00000442515 ZC3H11AO75152 810 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00642-202ENST00000442515 SMARCA1P28370 1054 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
LINC00642-202ENST00000442515 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 PDXDC2PQ6P474 469 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 ABHD15Q6UXT9 468 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 RALYLQ86SE5 291 aaKnown RBP15.87■□□□□ 0.13
LINC00642-202ENST00000442515 ZNF598Q86UK7 904 aaKnown RBP15.87■□□□□ 0.13
LINC00642-202ENST00000442515 METTL13Q8N6R0 699 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 RSAD2Q8WXG1 361 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 LOXHD1Q8IVV2 1947 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 SPTBN2O15020 2390 aa15.87■□□□□ 0.13
LINC00642-202ENST00000442515 DENND4AQ7Z401 1863 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 A0A0U1RQF3 1178 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 DDAH1O94760 285 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 DCNP07585 359 aaKnown RBP15.86■□□□□ 0.13
LINC00642-202ENST00000442515 CYP21A2P08686 494 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 KIF5BP33176 963 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 CLCN3P51790 818 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 POLGP54098 1239 aaPredicted RBP15.86■□□□□ 0.13
LINC00642-202ENST00000442515 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 DDX53Q86TM3 631 aaKnown RBP15.86■□□□□ 0.13
LINC00642-202ENST00000442515 PPFIBP1Q86W92 1011 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 ZNF654Q8IZM8 581 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
LINC00642-202ENST00000442515 SUMF1Q8NBK3 374 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 BCL7CQ8WUZ0 217 aaPredicted RBP15.86■□□□□ 0.13
LINC00642-202ENST00000442515 MAP3K14Q99558 947 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 TAF6LQ9Y6J9 622 aa15.86■□□□□ 0.13
LINC00642-202ENST00000442515 ATP4AP20648 1035 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 ANTXR2P58335 489 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 NLRP11P59045 1033 aaKnown RBP15.85■□□□□ 0.13
LINC00642-202ENST00000442515 CEP55Q53EZ4 464 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 C15orf39Q6ZRI6 1047 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 C1orf210Q8IVY1 113 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 PLEKHM2Q8IWE5 1019 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
LINC00642-202ENST00000442515 IGDCC4Q8TDY8 1250 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 IGSF21Q96ID5 467 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 PGBD1Q96JS3 809 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 ADAMTS10Q9H324 1103 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 OSBPL3Q9H4L5 887 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 DLGAP2Q9P1A6 1054 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 CACNA1GO43497 2377 aa15.85■□□□□ 0.13
LINC00642-202ENST00000442515 hCG_1642624A0A1W2PR95 340 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 EIF4BP23588 611 aaKnown RBP15.84■□□□□ 0.13
LINC00642-202ENST00000442515 CLCN4P51793 760 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 NONOQ15233 471 aaKnown RBP eCLIP15.84■□□□□ 0.13
LINC00642-202ENST00000442515 CKAP2LQ8IYA6 745 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 NCOA7Q8NI08 942 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 ZNF668Q96K58 619 aaPredicted RBP15.84■□□□□ 0.13
LINC00642-202ENST00000442515 MAP7D2Q96T17 732 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 VN1R3Q9BXE9 311 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 LY9Q9HBG7 655 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 AKT3Q9Y243 479 aa15.84■□□□□ 0.13
LINC00642-202ENST00000442515 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
LINC00642-202ENST00000442515 POTEMA6NI47 508 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 E7EWF7 191 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 KINO60870 393 aaKnown RBP15.83■□□□□ 0.12
LINC00642-202ENST00000442515 SRFP11831 508 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 GBP2P32456 591 aaPredicted RBP15.83■□□□□ 0.12
LINC00642-202ENST00000442515 GNAQP50148 359 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 PHLDB3Q6NSJ2 640 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 SWSAP1Q6NVH7 229 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 MIS18BP1Q6P0N0 1132 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 POTEGQ6S5H5 508 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
LINC00642-202ENST00000442515 HEATR3Q7Z4Q2 680 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 GPR152Q8TDT2 470 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 BBXQ8WY36 941 aaPredicted RBP15.83■□□□□ 0.12
LINC00642-202ENST00000442515 ARHGEF3Q9NR81 526 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 EPS15L1Q9UBC2 864 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 SIT1Q9Y3P8 196 aa15.83■□□□□ 0.12
LINC00642-202ENST00000442515 MEIS1O00470 390 aa15.82■□□□□ 0.12
LINC00642-202ENST00000442515 GALTP07902 379 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms