RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 NRIP1P48552 1158 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 GPC3P51654 580 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 UGCGQ16739 394 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 INF2Q27J81 1249 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 CTC1Q2NKJ3 1217 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 LETM2Q2VYF4 491 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 FAM102BQ5T8I3 360 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 PDE12Q6L8Q7 609 aaKnown RBP13.24□□□□□ -0.29
TTC28-203ENST00000442232 LRRC43Q8N309 656 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 LINC01465Q8N7H1 131 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 EFHBQ8N7U6 833 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 WASF1Q92558 559 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 LRFN3Q9BTN0 628 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 GCOM2Q9BZD3 368 aaPredicted RBP13.24□□□□□ -0.29
TTC28-203ENST00000442232 ADAMTS10Q9H324 1103 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 DACT1Q9NYF0 836 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 RAPGEFL1Q9UHV5 662 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
TTC28-203ENST00000442232 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 DDX11L8A8MPP1 907 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 MBTPS2O43462 519 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 TBX10O75333 385 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 FGF18O76093 207 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 DARSP14868 501 aaKnown RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
TTC28-203ENST00000442232 DNAJB1P25685 340 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
TTC28-203ENST00000442232 LTBRP36941 435 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 ZP2Q05996 745 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 ADAM15Q13444 863 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 DSC3Q14574 896 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 NEK8Q86SG6 692 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 GJA10Q969M2 543 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 ZNF668Q96K58 619 aaPredicted RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 INO80BQ9C086 356 aaPredicted RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 TLE6Q9H808 572 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 CD320Q9NPF0 282 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 ENTPD7Q9NQZ7 604 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
TTC28-203ENST00000442232 KCNJ14Q9UNX9 436 aa13.23□□□□□ -0.29
TTC28-203ENST00000442232 LINC01565O15544 149 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 DCXO43602 365 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 CCNT1O60563 726 aaKnown RBP13.22□□□□□ -0.29
TTC28-203ENST00000442232 IRS1P35568 1242 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 PSMC5P62195 406 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 FAM189BP81408 668 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 KRT17Q04695 432 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 SCRN1Q12765 414 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 CAMK1Q14012 370 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 ECHDC2Q86YB7 292 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 EXOC8Q8IYI6 725 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 ETNPPLQ8TBG4 499 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 KHSRPQ92945 711 aaKnown RBP eCLIP13.22□□□□□ -0.29
TTC28-203ENST00000442232 MBOAT7Q96N66 472 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 ZNF558Q96NG5 402 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
TTC28-203ENST00000442232 MRPL9Q9BYD2 267 aaKnown RBP13.22□□□□□ -0.29
TTC28-203ENST00000442232 NIFKQ9BYG3 293 aaKnown RBP13.22□□□□□ -0.29
TTC28-203ENST00000442232 M0R2N6 131 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 PFKFB2O60825 505 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 BAG4O95429 457 aaKnown RBP13.21□□□□□ -0.29
TTC28-203ENST00000442232 SKIP12755 728 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 PLA2G5P39877 138 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 ANAPC15P60006 121 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.29
TTC28-203ENST00000442232 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
TTC28-203ENST00000442232 TARBP2Q15633 366 aaKnown RBP13.21□□□□□ -0.29
TTC28-203ENST00000442232 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 ZNF410Q86VK4 478 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 SLC7A3Q8WY07 619 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 RSPH1Q8WYR4 309 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 CWH43Q9H720 699 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 SUCLA2Q9P2R7 463 aaPredicted RBP13.21□□□□□ -0.29
TTC28-203ENST00000442232 LZTS1Q9Y250 596 aa13.21□□□□□ -0.29
TTC28-203ENST00000442232 CARNS1A5YM72 827 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 PRR33A8MZF0 331 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 SLC37A4O43826 429 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 EDIL3O43854 480 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 EOMESO95936 686 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 FGFR4P22455 802 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 CA8P35219 290 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 QARSP47897 775 aaKnown RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 PPP2R5CQ13362 524 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 NPY5RQ15761 445 aa13.2□□□□□ -0.3
TTC28-203ENST00000442232 TWF2Q6IBS0 349 aaKnown RBP13.2□□□□□ -0.3
TTC28-203ENST00000442232 PPP4R3AQ6IN85 833 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms