RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 OATP04181 439 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 HOXC6P09630 235 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 CASP5P51878 434 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 EPM2AIP1Q7L775 607 aaPredicted RBP8.89□□□□□ -0.99
CCDC39-201ENST00000442201 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 GPATCH11Q8N954 259 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 GPR20Q99678 358 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 CYP26B1Q9NR63 512 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 NRBP2Q9NSY0 501 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 LIMA1Q9UHB6 759 aaKnown RBP8.89□□□□□ -0.99
CCDC39-201ENST00000442201 RBM47A0AV96 593 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 LRRC10BA6NIK2 292 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 EIF3DO15371 548 aaKnown RBP eCLIP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 MYBP10242 640 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 FKBP3Q00688 224 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 KRT31Q15323 416 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 KNOP1Q1ED39 458 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 BMT2Q1RMZ1 405 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 ZCWPW2Q504Y3 356 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PPP4R3CPQ6ZMV5 832 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 APTXQ7Z2E3 356 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 GOLGA6L1Q8N7Z2 621 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 MCPH1Q8NEM0 835 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 AFAP1L1Q8TED9 768 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 SOCS4Q8WXH5 440 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 GLG1Q92896 1179 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 COPS5Q92905 334 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 CAPNS2Q96L46 248 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PCYT2Q99447 389 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PCDHB13Q9Y5F0 798 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 A0A1B0GTH6 734 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 RASSF10A6NK89 507 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PRPF6O94906 941 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 GH1P01241 217 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PLS3P13797 630 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 ATP4AP20648 1035 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 NMT1P30419 496 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 ACVR2BQ13705 512 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 MTERF2Q49AM1 385 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 FAM102BQ5T8I3 360 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 ZNF720Q7Z2F6 126 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 CCDC186Q7Z3E2 898 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 FILIP1Q7Z7B0 1213 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 REM2Q8IYK8 340 aaPredicted RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 ZNF507Q8TCN5 953 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 EEF2KMTQ96G04 330 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 FAM167AQ96KS9 214 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 FAM210AQ96ND0 272 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 CEP89Q96ST8 783 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 KATNBL1Q9H079 304 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 KCTD10Q9H3F6 313 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PRDM16Q9HAZ2 1276 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 TRIM66O15016 1216 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 N4BP3O15049 544 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 CALRP27797 417 aaKnown RBP8.88□□□□□ -0.99
CCDC39-201ENST00000442201 RGS2P41220 211 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 ADCYAP1R1P41586 468 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 MAP9Q49MG5 647 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 KIFAP3Q92845 792 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 FIZ1Q96SL8 496 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 IMPACTQ9P2X3 320 aa8.88□□□□□ -0.99
CCDC39-201ENST00000442201 PDXKO00764 312 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 LGR5O75473 907 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 COPB1P53618 953 aaKnown RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 ARHGAP1Q07960 439 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 ALCAMQ13740 583 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 NR1I3Q14994 352 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 EDRF1Q3B7T1 1238 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 TMEM63BQ5T3F8 832 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 USP6NLQ92738 828 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 CNOT6LQ96LI5 555 aaKnown RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 VPS16Q9H269 839 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 ATP6V0A4Q9HBG4 840 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 INTS13Q9NVM9 706 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 TAB2Q9NYJ8 693 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 NRBP1Q9UHY1 535 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 UBE4BO95155 1302 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 EMSYQ7Z589 1322 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 K7ENM7 598 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 AOC2O75106 756 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 CPP00450 1065 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 CYP2B6P20813 491 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 YY1P25490 414 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 SLC26A2P50443 739 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 APLP1P51693 650 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 POLGP54098 1239 aaPredicted RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 IRF5Q13568 498 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 ZC3H12AQ5D1E8 599 aaKnown RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 IQSEC1Q6DN90 963 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 LRRC55Q6ZSA7 311 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 PLPPR4Q7Z2D5 763 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 VSTM4Q8IW00 320 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 SLC17A8Q8NDX2 589 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms