RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ZMYM1Q5SVZ6 1142 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ANKRD13CQ8N6S4 541 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 BEST2Q8NFU1 509 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 HSPH1Q92598 858 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 SLC7A5P2Q9GIP4 190 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 COPRSQ9NQ92 184 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 GINM1Q9NU53 330 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 GTSE1Q9NYZ3 720 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ZFP69BQ9UJL9 534 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 MAN1B1Q9UKM7 699 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ENC1O14682 589 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 CLDN3O15551 220 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ACSL3O95573 720 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 MYBL1P10243 752 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 PHKA2P46019 1235 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 GYG1P46976 350 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 CHRNDQ07001 517 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 DMTNQ08495 405 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 MKRN3Q13064 507 aaKnown RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 KRT27Q7Z3Y8 459 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 OTUD7AQ8TE49 926 aaPredicted RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 ALKBH8Q96BT7 664 aaKnown RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 TESK2Q96S53 571 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP46-201ENST00000441222 NDST4Q9H3R1 872 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 PFASO15067 1338 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 PPEF1O14829 653 aaPredicted RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 HUS1O60921 280 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 DEAF1O75398 565 aaPredicted RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 MOCS3O95396 460 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 EIF4A3P38919 411 aaKnown RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 BCAMP50895 628 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 GPC5P78333 572 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 AP3B2Q13367 1082 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ALKBH5Q6P6C2 394 aaKnown RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 DYRK4Q9NR20 520 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 PKD2L2Q9NZM6 624 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ANAPC7Q9UJX3 599 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ABCC4O15439 1325 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 FRMD3A2A2Y4 597 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ASNSP08243 561 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 KCNA1Q09470 495 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 TBC1D1Q86TI0 1168 aaPredicted RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 MB21D1Q8N884 522 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 DTX3LQ8TDB6 740 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 TTC17Q96AE7 1141 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ZNF496Q96IT1 587 aaPredicted RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 CYTH2Q99418 400 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP46-201ENST00000441222 ADAM22Q9P0K1 906 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 STAP2Q9UGK3 403 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 FBXO40Q9UH90 709 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 INTUQ9ULD6 942 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 ARHGAP31Q2M1Z3 1444 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 CLASP1Q7Z460 1538 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 C16orf96A6NNT2 1141 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 GOLGA8RI6L899 631 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 CXCR5P32302 372 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 NBPF20Q3BBV1 942 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 PLEKHM3Q6ZWE6 761 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 RBM46Q8TBY0 533 aaKnown RBP7.11□□□□□ -1.27
USP46-201ENST00000441222 WNT8AQ9H1J5 351 aa7.11□□□□□ -1.27
USP46-201ENST00000441222 KCNA6P17658 529 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 SCNN1DP51172 638 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 PRAMEP78395 509 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 ZNF827Q17R98 1081 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 PRUNE1Q86TP1 453 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 MAP4K1Q92918 833 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 CCDC90BQ9GZT6 254 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 ADA2Q9NZK5 511 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
USP46-201ENST00000441222 ZSCAN9O15535 394 aaPredicted RBP7.1□□□□□ -1.27
USP46-201ENST00000441222 PRPF3O43395 683 aaKnown RBP7.1□□□□□ -1.27
USP46-201ENST00000441222 IL6STP40189 918 aaPredicted RBP7.1□□□□□ -1.27
USP46-201ENST00000441222 MRPS15P82914 257 aaKnown RBP7.1□□□□□ -1.27
USP46-201ENST00000441222 AP1B1Q10567 949 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 MTERF2Q49AM1 385 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 PBXIP1Q96AQ6 731 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 NLRP4Q96MN2 994 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 GOLPH3LQ9H4A5 285 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 ZNF556Q9HAH1 456 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 SAYSD1Q9NPB0 183 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 A0A0G2JND7 137 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 GRID2IPA4D2P6 1211 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 CLIC2O15247 247 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 IFNAR1P17181 557 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 ZNF555Q8NEP9 628 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 TNIP2Q8NFZ5 429 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 OR6B3Q8NGW1 331 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 DIABLOQ9NR28 239 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 IP6K2Q9UHH9 426 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 RCOR1Q9UKL0 485 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 FAM32AQ9Y421 112 aaKnown RBP7.1□□□□□ -1.27
USP46-201ENST00000441222 APOA4P06727 396 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 S100A5P33763 92 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 COPB2P35606 906 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 INPP5AQ14642 412 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 ASIC4Q96FT7 647 aa7.1□□□□□ -1.27
USP46-201ENST00000441222 PPCSQ9HAB8 311 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms