RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 INTS9Q9NV88 658 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 NOC2LQ9Y3T9 749 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 GAS7O60861 476 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 IL1R1P14778 569 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 PCK1P35558 622 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 NUGGCQ68CJ6 796 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 DAGLBQ8NCG7 672 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 CCDC197Q8NCU1 140 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 EPS8L3Q8TE67 593 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 CCDC127Q96BQ5 260 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 MTMR9Q96QG7 549 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 OSGEPQ9NPF4 335 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 RABGAP1Q9Y3P9 1069 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 GSTTP1A0A1W2PQM5 241 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 GOLGA8IPA6NC78 632 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 GOLGA8JA6NMD2 632 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 EXOC3O60645 756 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 CPP00450 1065 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ANKRD20A8PQ5CZ79 823 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 THEMIS2Q5TEJ8 643 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ANKS4BQ8N8V4 417 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 PARD3BQ8TEW8 1205 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 KLHL29Q96CT2 875 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 FGFR1OP2Q9NVK5 253 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 NID2Q14112 1375 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ANP32DO95626 131 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 MYL1P05976 194 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 EPB41P11171 864 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ALDH1B1P30837 517 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ITGB3BPQ13352 177 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 SYDE2Q5VT97 1194 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 NSMFQ6X4W1 530 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 KDM7AQ6ZMT4 941 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM228AQ86W67 206 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 SP8Q8IXZ3 490 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 LARGE2Q8N3Y3 721 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 ANKS1AQ92625 1134 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 DHX36Q9H2U1 1008 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 TAF1DQ9H5J8 278 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 TRPC5Q9UL62 973 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-202ENST00000439374 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM86B1E9PN63 330 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM86B2P0C5J1 330 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 CYP11B2P19099 503 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 COG2Q14746 738 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 PDXDC1Q6P996 788 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 IQCKQ8N0W5 287 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 SCFD1Q8WVM8 642 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 GCNT4Q9P109 453 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 PLAGL2Q9UPG8 496 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 ATMINO43313 823 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 ALAS1P13196 640 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 CREB1P16220 341 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 SMTNP53814 917 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 PTK2Q05397 1052 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 LRRC63Q05C16 580 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 DGKZQ13574 1117 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 LONRF1Q17RB8 773 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 LONP2Q86WA8 852 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 NLGN1Q8N2Q7 840 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 RUSC1Q9BVN2 902 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 UTP11Q9Y3A2 253 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 C4AP0C0L4 1744 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 C4BP0C0L5 1744 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 DUOX1Q9NRD9 1551 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 WDR91A4D1P6 747 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 GRID2IPA4D2P6 1211 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 UBOX5O94941 541 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 KCNMA1Q12791 1236 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 NBPF20Q3BBV1 942 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 HS2ST1Q7LGA3 356 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 METTL13Q8N6R0 699 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 PWWP2AQ96N64 755 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 MAGEF1Q9HAY2 307 aa10.75□□□□□ -0.69
CDC42SE1-202ENST00000439374 DOT1LQ8TEK3 1739 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 MYH3P11055 1940 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 CCDC169A6NNP5 214 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 HMGB1P1B2RPK0 211 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 UAP1Q16222 522 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 ALKBH5Q6P6C2 394 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 VPS36Q86VN1 386 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 GLYCTKQ8IVS8 523 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM178BQ8IXR5 827 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 AGAP11Q8TF27 550 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 LRRC45Q96CN5 670 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 HOOK2Q96ED9 719 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM84AQ96KN4 292 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 ERGIC2Q96RQ1 377 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 ZNF277Q9NRM2 450 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms