RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 UBA6A0AVT1 1052 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 TLDC2A0PJX2 215 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 ENPP3O14638 875 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 MEOX1P50221 254 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 STAT5BP51692 787 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 MAP3K12Q12852 859 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 PCBP1Q15365 356 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 ESRP1Q6NXG1 681 aaKnown RBP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZNF585AQ6P3V2 769 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 MAMDC4Q6UXC1 1216 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 NIM1KQ8IY84 436 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 GIMAP8Q8ND71 665 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 LPPQ93052 612 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 FEZ1Q99689 392 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 DPYSL5Q9BPU6 564 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 IFT57Q9NWB7 429 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 PUF60Q9UHX1 559 aaKnown RBP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 PLAAQ9Y263 795 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZKSCAN5Q9Y2L8 839 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 ATAD2BQ9ULI0 1458 aa4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 RSF1Q96T23 1441 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P12-201ENST00000438745 PLSCR1O15162 318 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 TGM5O43548 720 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 CDC14BO60729 498 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 CDC45O75419 566 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 COMTP21964 271 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 RPS19P39019 145 aaKnown RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 ADCY7P51828 1080 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 BCAR1P56945 870 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 SMAD3P84022 425 aaKnown RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 LRRC32Q14392 662 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 MYBPC3Q14896 1274 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 DGKDQ16760 1214 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 SLFN12LQ6IEE8 588 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 KLHDC10Q6PID8 442 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 BMP8AQ7Z5Y6 402 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZZZ3Q8IYH5 903 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 GPR135Q8IZ08 494 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 RTKN2Q8IZC4 609 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 NXPE1Q8N323 547 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 EFHBQ8N7U6 833 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 RABGGTAQ92696 567 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 GFM2Q969S9 779 aaKnown RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 PLA2G12BQ9BX93 195 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 NELFAQ9H3P2 528 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 PCIF1Q9H4Z3 704 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 AGO3Q9H9G7 860 aaKnown RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 H2AFY2Q9P0M6 372 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 SAE1Q9UBE0 346 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 TCAF1Q9Y4C2 921 aa4.78□□□□□ -1.64
HMGB3P12-201ENST00000438745 HMGXB3Q12766 1538 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 SYNJ2O15056 1496 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 A0A087X0B3 334 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 C2orf78A6NCI8 922 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 ZNF891A8MT65 544 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 MUSKO15146 869 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 NEK4P51957 841 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 ADAM8P78325 824 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 ADAM15Q13444 863 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 PLEKHG4Q58EX7 1191 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 GPR158Q5T848 1215 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 POLNQ7Z5Q5 900 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 SPRED1Q7Z699 444 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 PHYKPLQ8IUZ5 450 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 DHX37Q8IY37 1157 aaKnown RBP4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 AHI1Q8N157 1196 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 PPM1KQ8N3J5 372 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 SH3RF3Q8TEJ3 882 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 TUBGCP5Q96RT8 1024 aa4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 TARS2Q9BW92 718 aaKnown RBP4.77□□□□□ -1.65
HMGB3P12-201ENST00000438745 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 SLC26A4O43511 780 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 KPNA6O60684 536 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 H2AFYO75367 372 aaKnown RBP4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 PRPF6O94906 941 aaKnown RBP4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 FOXL1Q12952 345 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 SEPT7Q16181 437 aaKnown RBP4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 HS1BP3Q53T59 392 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 SDE2Q6IQ49 451 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 CNNM4Q6P4Q7 775 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 SMC1BQ8NDV3 1235 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 OR5AN1Q8NGI8 311 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 PPP1R14CQ8TAE6 165 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 CHTF18Q8WVB6 975 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 MFSD3Q96ES6 412 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 SLC6A15Q9H2J7 730 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 C12orf65Q9H3J6 166 aaKnown RBP4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 PLA2G3Q9NZ20 509 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 MAGEL2Q9UJ55 1249 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 DENND2AQ9ULE3 1009 aa4.76□□□□□ -1.65
HMGB3P12-201ENST00000438745 BAZ1BQ9UIG0 1483 aaKnown RBP4.75□□□□□ -1.65
HMGB3P12-201ENST00000438745 CEP164Q9UPV0 1460 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms