RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SLC26A4O43511 780 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 GAS2O43903 313 aaKnown RBP17.97■□□□□ 0.47
SNRPB-202ENST00000438552 GPR32O75388 356 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 PFKMP08237 780 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 TXLNAP40222 546 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 GPC3P51654 580 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 NLRP11P59045 1033 aaKnown RBP17.97■□□□□ 0.47
SNRPB-202ENST00000438552 SHHQ15465 462 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 AXDND1Q5T1B0 1012 aaPredicted RBP17.97■□□□□ 0.47
SNRPB-202ENST00000438552 PADI6Q6TGC4 694 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 MAEAQ7L5Y9 396 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 RHPN2Q8IUC4 686 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 EXOC8Q8IYI6 725 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 RPUSD2Q8IZ73 545 aaKnown RBP17.97■□□□□ 0.47
SNRPB-202ENST00000438552 TMEM40Q8WWA1 233 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 PSPC1Q8WXF1 523 aaKnown RBP17.97■□□□□ 0.47
SNRPB-202ENST00000438552 SCLT1Q96NL6 688 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 GPRC5CQ9NQ84 441 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 RCOR1Q9UKL0 485 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 PCDHA7Q9UN72 937 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 GBF1Q92538 1859 aa17.97■□□□□ 0.47
SNRPB-202ENST00000438552 A0A087X0B3 334 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■□□□□ 10.7
SNRPB-202ENST00000438552 SHC4Q6S5L8 630 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 TSHZ1Q6ZSZ6 1077 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 OTOP2Q7RTS6 562 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 NLRP7Q8WX94 980 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 NLRP4Q96MN2 994 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 RUSC1Q9BVN2 902 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
SNRPB-202ENST00000438552 ADAMTS10Q9H324 1103 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
SNRPB-202ENST00000438552 FGBP02675 491 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 CD52P31358 61 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 CRYBB1P53674 252 aaPredicted RBP17.95■□□□□ 0.46
SNRPB-202ENST00000438552 PLEKHG4Q58EX7 1191 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 CNKSR3Q6P9H4 555 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 TDHQ8IZJ6 230 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 MCPH1Q8NEM0 835 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 DBF4BQ8NFT6 615 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 PRPF31Q8WWY3 499 aaKnown RBP17.95■□□□□ 0.46
SNRPB-202ENST00000438552 RNPC3Q96LT9 517 aaKnown RBP17.95■□□□□ 0.46
SNRPB-202ENST00000438552 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
SNRPB-202ENST00000438552 IFIH1Q9BYX4 1025 aaKnown RBP17.95■□□□□ 0.46
SNRPB-202ENST00000438552 AGO3Q9H9G7 860 aaKnown RBP17.95■□□□□ 0.46
SNRPB-202ENST00000438552 BLOC1S4Q9NUP1 217 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 CHMP5Q9NZZ3 219 aa17.95■□□□□ 0.46
SNRPB-202ENST00000438552 A0A087WZ62 844 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 PLA2G4BP0C869 781 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 CYP11B2P19099 503 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 SLC12A3P55017 1021 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 LAMTOR4Q0VGL1 99 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 MCM6Q14566 821 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 PDILTQ8N807 584 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 RAD54LQ92698 747 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 FDXACB1Q9BRP7 624 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-202ENST00000438552 SCAND2PQ9GZW5 306 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-202ENST00000438552 CXXC1Q9P0U4 656 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-202ENST00000438552 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
SNRPB-202ENST00000438552 NOC2LQ9Y3T9 749 aaKnown RBP17.94■□□□□ 0.46
SNRPB-202ENST00000438552 ZBBXA8MT70 800 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 ACTN1P12814 892 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 ARL2P36404 184 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 PAK2Q13177 524 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 CAPSQ13938 189 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
SNRPB-202ENST00000438552 RINT1Q6NUQ1 792 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 FAM228AQ86W67 206 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 KCTD17Q8N5Z5 321 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 SYT2Q8N9I0 419 aaPredicted RBP17.93■□□□□ 0.46
SNRPB-202ENST00000438552 HERVK_113Q902F9 699 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 SEPT8Q92599 483 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 PANK2Q9BZ23 570 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 LAMA2P24043 3122 aaKnown RBP17.93■□□□□ 0.46
SNRPB-202ENST00000438552 TRIOBPQ9H2D6 2365 aa17.93■□□□□ 0.46
SNRPB-202ENST00000438552 CSDE1O75534 798 aaKnown RBP17.92■□□□□ 0.46
SNRPB-202ENST00000438552 RPS6KA5O75582 802 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 SRGAP2CP0DJJ0 459 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 DARSP14868 501 aaKnown RBP17.92■□□□□ 0.46
SNRPB-202ENST00000438552 FGFR4P22455 802 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 GLRA2P23416 452 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 STAT6P42226 847 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 TPRNQ4KMQ1 711 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 RRAGBQ5VZM2 374 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 C1orf186Q6ZWK4 172 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 ZNF410Q86VK4 478 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 RNF149Q8NC42 400 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 BSNDQ8WZ55 320 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 LARP4BQ92615 738 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms