RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ZNF267Q14586 743 aaPredicted RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 ZNF174Q15697 407 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 RRP12Q5JTH9 1297 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 KIAA1958Q8N8K9 716 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 VPS37AQ8NEZ2 397 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 SLC35G2Q8TBE7 412 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 WHAMMQ8TF30 809 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 FAM46AQ96IP4 442 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 ELAC2Q9BQ52 826 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 API5Q9BZZ5 524 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 SMURF1Q9HCE7 757 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 MIS18AQ9NYP9 233 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 MEGF6O75095 1541 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 TRBV23OR9-2A0A075B6M9 112 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 SLC12A8A0AV02 714 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 RASSF10A6NK89 507 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 PMM2O15305 246 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 WDHD1O75717 1129 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 ZNF205O95201 554 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 SERPINB3P29508 390 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 LSP1P33241 339 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 BCL6P41182 706 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 HTR3AP46098 478 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 SMAD3P84022 425 aaKnown RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 LSAMPQ13449 338 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 PDCD1Q15116 288 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 SMAD2Q15796 467 aaKnown RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 AMOTQ4VCS5 1084 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 FSTL4Q6MZW2 842 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 LINC00114Q6XXX2 140 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 IRF7Q92985 503 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 CDIP1Q9H305 208 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 RWDD1Q9H446 243 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 CCM2LQ9NUG4 571 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 BTG4Q9NY30 223 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 CLDND1Q9NY35 253 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 PNMA2Q9UL42 364 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 PTPRCP08575 1304 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 MRC1P22897 1456 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 ZNF561-AS1K7EIQ3 104 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 DVL2O14641 736 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 TERTO14746 1132 aaKnown RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 NRDCO43847 1150 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 CTNND1O60716 968 aaKnown RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 FKTNO75072 461 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 ZBTB48P10074 688 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 PHC1P78364 1004 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 TAF7Q15545 349 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 ZNF530Q6P9A1 599 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 B3GNT9Q6UX72 402 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 MFSD4AQ8N468 514 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 HEXIM2Q96MH2 286 aaKnown RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 PTCHD1Q96NR3 888 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 TAAR9Q96RI9 348 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 PCIF1Q9H4Z3 704 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 TCFL5Q9UL49 500 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
SPEN-202ENST00000438066 CAPN6Q9Y6Q1 641 aa7.55□□□□□ -1.2
SPEN-202ENST00000438066 SHANK3Q9BYB0 1731 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 PXDNLA1KZ92 1463 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 FGF10O15520 208 aaPredicted RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 KDM1AO60341 852 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 MYL3P08590 195 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 ZNF865P0CJ78 1059 aaPredicted RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 TRAPPC10P48553 1259 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 ADCY1Q08828 1119 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 PLEKHO1Q53GL0 409 aaPredicted RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 INO80DQ53TQ3 878 aaPredicted RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 PRRT3Q5FWE3 981 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 FAM83BQ5T0W9 1011 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 Q6ZS46 218 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 TICAM2Q86XR7 235 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 PIWIL2Q8TC59 973 aaKnown RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 JADE3Q92613 823 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 UTP4Q969X6 686 aaKnown RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 FOXP3Q9BZS1 431 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 MAF1Q9H063 256 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 KCNF1Q9H3M0 494 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 CHMP4BQ9H444 224 aaKnown RBP7.54□□□□□ -1.2
SPEN-202ENST00000438066 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
SPEN-202ENST00000438066 C1orf112Q9NSG2 853 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 ATP10DQ9P241 1426 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 PCDHA11Q9Y5I1 949 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 ROBO1Q9Y6N7 1651 aa7.54□□□□□ -1.2
SPEN-202ENST00000438066 C5P01031 1676 aa7.53□□□□□ -1.2
SPEN-202ENST00000438066 AHDC1Q5TGY3 1603 aaPredicted RBP7.53□□□□□ -1.2
SPEN-202ENST00000438066 LTBP4Q8N2S1 1624 aa7.53□□□□□ -1.2
SPEN-202ENST00000438066 COL22A1Q8NFW1 1626 aaPredicted RBP7.53□□□□□ -1.2
SPEN-202ENST00000438066 COL5A2P05997 1499 aaPredicted RBP7.53□□□□□ -1.2
SPEN-202ENST00000438066 KDM6AO15550 1401 aaPredicted RBP7.53□□□□□ -1.2
SPEN-202ENST00000438066 SSU72P8A0A1W2PR75 194 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms