RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 MGEA5O60502 916 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 MED24O75448 989 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 MUTP22033 750 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 RPA1P27694 616 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 ERVK-21P61565 698 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 DSC3Q14574 896 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 TCP11Q8WWU5 503 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 NLRP7Q8WX94 980 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 GCOM2Q9BZD3 368 aaPredicted RBP19.88■□□□□ 0.77
NCSTN-208ENST00000438008 RC3H2Q9HBD1 1191 aaKnown RBP19.88■□□□□ 0.77
NCSTN-208ENST00000438008 C1orf112Q9NSG2 853 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 STK24Q9Y6E0 443 aa19.88■□□□□ 0.77
NCSTN-208ENST00000438008 COL4A6Q14031 1691 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 SARSP49591 514 aaKnown RBP19.87■□□□□ 0.77
NCSTN-208ENST00000438008 RARRES1P49788 294 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 ADGRE1Q14246 886 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 EMC2Q15006 297 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 HAUS3Q68CZ6 603 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 BRAPQ7Z569 592 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 RHPN2Q8IUC4 686 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 NPAS4Q8IUM7 802 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 IGSF22Q8N9C0 903 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 PSPC1Q8WXF1 523 aaKnown RBP19.87■□□□□ 0.77
NCSTN-208ENST00000438008 ZNF689Q96CS4 500 aaPredicted RBP19.87■□□□□ 0.77
NCSTN-208ENST00000438008 ZNF668Q96K58 619 aaPredicted RBP19.87■□□□□ 0.77
NCSTN-208ENST00000438008 SCLT1Q96NL6 688 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 NACC1Q96RE7 527 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 TGS1Q96RS0 853 aaKnown RBP19.87■□□□□ 0.77
NCSTN-208ENST00000438008 ADAM2Q99965 735 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 RAB34Q9BZG1 259 aa19.87■□□□□ 0.77
NCSTN-208ENST00000438008 A0A087WZ62 844 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 DENND3A2RUS2 1198 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 ASAP2O43150 1006 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 DGAT1O75907 488 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 DGKIO75912 1065 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 STAG3L1P0CL83 205 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 POU3F3P20264 500 aaPredicted RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 FAM189BP81408 668 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 ATP2C1P98194 919 aaPredicted RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 SLC24A5Q71RS6 500 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 SPRED2Q7Z698 418 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 PIGOQ8TEQ8 1089 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 PRPF31Q8WWY3 499 aaKnown RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 ARNTL2Q8WYA1 636 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 TMEM143Q96AN5 459 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 MTRQ99707 1265 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 FDXACB1Q9BRP7 624 aaPredicted RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 INO80BQ9C086 356 aaPredicted RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 CERS4Q9HA82 394 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 XPNPEP1Q9NQW7 623 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 LRWD1Q9UFC0 647 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 DBR1Q9UK59 544 aaKnown RBP19.86■□□□□ 0.77
NCSTN-208ENST00000438008 COL4A3BPQ9Y5P4 624 aa19.86■□□□□ 0.77
NCSTN-208ENST00000438008 TTC3P53804 2025 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 CDH23Q9H251 3354 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 EPOPA6NHQ4 379 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 C9IYK1 514 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 IL17AQ16552 155 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 DTHD1Q6ZMT9 781 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 KSR1Q8IVT5 923 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 MAFAQ8NHW3 353 aaPredicted RBP19.85■□□□□ 0.77
NCSTN-208ENST00000438008 SAMD11Q96NU1 681 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 ATP6V0A4Q9HBG4 840 aa19.85■□□□□ 0.77
NCSTN-208ENST00000438008 ZSCAN20P17040 1043 aaPredicted RBP19.84■□□□□ 0.77
NCSTN-208ENST00000438008 SYT1P21579 422 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 LAMTOR4Q0VGL1 99 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 ARL6IP4Q66PJ3 421 aaKnown RBP19.84■□□□□ 0.77
NCSTN-208ENST00000438008 POTEGQ6S5H5 508 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 FERMT3Q86UX7 667 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 NLRP4Q96MN2 994 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 CCDC43Q96MW1 224 aaKnown RBP19.84■□□□□ 0.77
NCSTN-208ENST00000438008 ELAC1Q9H777 363 aaKnown RBP19.84■□□□□ 0.77
NCSTN-208ENST00000438008 IFT122Q9HBG6 1241 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 CHST12Q9NRB3 414 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 CHD7Q9P2D1 2997 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 LOXHD1Q8IVV2 1947 aa19.84■□□□□ 0.77
NCSTN-208ENST00000438008 ADGRA3Q8IWK6 1321 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 A0A087WWV3 80 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 VPS37CA5D8V6 355 aaPredicted RBP19.83■□□□□ 0.77
NCSTN-208ENST00000438008 RFXAPO00287 272 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 SFPQP23246 707 aaKnown RBP eCLIP19.83■□□□□ 0.77
NCSTN-208ENST00000438008 ARL2P36404 184 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 CCT6AP40227 531 aaKnown RBP19.83■□□□□ 0.77
NCSTN-208ENST00000438008 MXD4Q14582 209 aaPredicted RBP19.83■□□□□ 0.77
NCSTN-208ENST00000438008 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 FIBCD1Q8N539 461 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 BMP2KQ9NSY1 1161 aaPredicted RBP19.83■□□□□ 0.77
NCSTN-208ENST00000438008 LRFN2Q9ULH4 789 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 PCDHB7Q9Y5E2 793 aa19.83■□□□□ 0.77
NCSTN-208ENST00000438008 LPXNO60711 386 aa19.82■□□□□ 0.76
NCSTN-208ENST00000438008 CSDE1O75534 798 aaKnown RBP19.82■□□□□ 0.76
NCSTN-208ENST00000438008 FGFR4P22455 802 aa19.82■□□□□ 0.76
NCSTN-208ENST00000438008 POU5F1BQ06416 359 aa19.82■□□□□ 0.76
NCSTN-208ENST00000438008 ECM1Q16610 540 aa19.82■□□□□ 0.76
NCSTN-208ENST00000438008 HSCBQ8IWL3 235 aa19.82■□□□□ 0.76
NCSTN-208ENST00000438008 CMTR2Q8IYT2 770 aaKnown RBP19.82■□□□□ 0.76
NCSTN-208ENST00000438008 CLP1Q92989 425 aaKnown RBP19.82■□□□□ 0.76
NCSTN-208ENST00000438008 C17orf80Q9BSJ5 609 aa19.82■□□□□ 0.76
NCSTN-208ENST00000438008 TMEM161AQ9NX61 479 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms