RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 USP17L24Q0WX57 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 ASIC2Q16515 512 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 HERC4Q5GLZ8 1057 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L6PQ6QN14 398 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 POTEBQ6S5H4 581 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 HAS1Q92839 578 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 EBF2Q9HAK2 575 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 STAT3P40763 770 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 IRX1P78414 480 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 SARNPP82979 210 aaKnown RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 ZKSCAN8Q15776 578 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 SP8Q8IXZ3 490 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 DNAJC19Q96DA6 116 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 ZNF317Q96PQ6 595 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 SPAG5Q96R06 1193 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 PRMT1Q99873 361 aaKnown RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 SLC12A4Q9UP95 1085 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 A8MUI8 341 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 UPP2O95045 317 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 ACTN1P12814 892 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 PTK2Q05397 1052 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 PEX26Q7Z412 305 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 ANKRD23Q86SG2 305 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 DAAM2Q86T65 1068 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 KIF2BQ8N4N8 673 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 ZNF483Q8TF39 744 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 ZNF570Q96NI8 536 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 LRRC27Q9C0I9 530 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 PSTPIP2Q9H939 334 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 CNOT10Q9H9A5 744 aaKnown RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 BMP2KQ9NSY1 1161 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 SAMD15Q9P1V8 674 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 STK38LQ9Y2H1 464 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 FAM196BA6NMK8 535 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 SHMT1P34896 483 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 DOK7Q18PE1 504 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 TRPM8Q7Z2W7 1104 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 GPBP1Q86WP2 473 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 ACTRT1Q8TDG2 376 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 PBKQ96KB5 322 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 FMO2Q99518 471 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 UTP11Q9Y3A2 253 aaKnown RBP13.41□□□□□ -0.26
TMEM116-202ENST00000437003 NR2E1Q9Y466 385 aa13.41□□□□□ -0.26
TMEM116-202ENST00000437003 UBOX5O94941 541 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 IFI35P80217 286 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 GRIK3Q13003 919 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 MAEAQ7L5Y9 396 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 TLCD1Q96CP7 247 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 FAM167BQ9BTA0 163 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 EDEM3Q9BZQ6 932 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 G3V3G9 751 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 ZBTB5O15062 677 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 CALRP27797 417 aaKnown RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 PSMD2Q13200 908 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
TMEM116-202ENST00000437003 ZNF571Q7Z3V5 609 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 EIF1ADQ8N9N8 165 aaKnown RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 NUCKS1Q9H1E3 243 aaKnown RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 INTS9Q9NV88 658 aaKnown RBP13.4□□□□□ -0.26
TMEM116-202ENST00000437003 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 SPDYE3A6NKU9 549 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 MEIS1O00470 390 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 HLA-DOAP06340 250 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 CLK2P49760 499 aaKnown RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 SNAP25P60880 206 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 UBAP2Q5T6F2 1119 aaKnown RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 CAPRIN2Q6IMN6 1127 aaKnown RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 TAX1BP1Q86VP1 789 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 CCDC26Q8TAB7 109 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 ATXN2LQ8WWM7 1075 aaKnown RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 NOP53Q9NZM5 478 aaKnown RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 RPS6KL1Q9Y6S9 549 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 FOCADQ5VW36 1801 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms