RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 NR1I2O75469 434 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 PFKFB1P16118 471 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 KCNA5P22460 613 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGCL-204ENST00000436439 ACTR2P61160 394 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 GRIN1Q05586 938 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 PDIA5Q14554 519 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 IL17AQ16552 155 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 CALCRLQ16602 461 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 CCDC183Q5T5S1 534 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 LENG9Q96B70 501 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 FAM20AQ96MK3 541 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 TIGD1Q96MW7 591 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 FAM49AQ9H0Q0 323 aaPredicted RBP12.24□□□□□ -0.45
HMGCL-204ENST00000436439 KCNMB3Q9NPA1 279 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 FAM13BQ9NYF5 915 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 NCOR1O75376 2440 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 NFASCO94856 1347 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 ADGRA3Q8IWK6 1321 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 BDP1A6H8Y1 2624 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 FNDC1Q4ZHG4 1894 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 VWA3AA6NCI4 1184 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 FAM86B1E9PN63 330 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 FAM86B2P0C5J1 330 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 IL9P15248 144 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 CD52P31358 61 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 NDUFA8P51970 172 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 MRPS6P82932 125 aaKnown RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 SETQ01105 290 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 TMEM62Q0P6H9 643 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 LEXMQ3ZCV2 418 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 CEP55Q53EZ4 464 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 TCEAL5Q5H9L2 206 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 TSHZ1Q6ZSZ6 1077 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 RSPH3Q86UC2 560 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 RTN4RL1Q86UN2 441 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 ELOA2Q8IYF1 753 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 SLFN12Q8IYM2 578 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 FIBCD1Q8N539 461 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 IGSF22Q8N9C0 903 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 ETNPPLQ8TBG4 499 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 HAS1Q92839 578 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
HMGCL-204ENST00000436439 DACT1Q9NYF0 836 aa12.23□□□□□ -0.45
HMGCL-204ENST00000436439 SYCE3A1L190 88 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 RRN3P2A6NIE6 340 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 DDX39AO00148 427 aaKnown RBP12.22□□□□□ -0.45
HMGCL-204ENST00000436439 MEIS1O00470 390 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 ATG7O95352 703 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 CCNE2O96020 404 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 CTNNB1P35222 781 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 STAT5BP51692 787 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 PTPROQ16827 1216 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 BANK1Q8NDB2 785 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 ANP32BQ92688 251 aaKnown RBP12.22□□□□□ -0.45
HMGCL-204ENST00000436439 UIMC1Q96RL1 719 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 RAB34Q9BZG1 259 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 CCSER1Q9C0I3 900 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 AZI2Q9H6S1 392 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 KCNH3Q9ULD8 1083 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 MYO7AQ13402 2215 aa12.22□□□□□ -0.45
HMGCL-204ENST00000436439 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 C5orf67F2Z3F1 127 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 H3BQ06 376 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-204ENST00000436439 GRM6O15303 877 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 SLC26A4O43511 780 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 DGKIO75912 1065 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 ZNF202O95125 648 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 ZNF76P36508 570 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 SYKP43405 635 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 TIGD5Q53EQ6 642 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 PRR16Q569H4 304 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.45
HMGCL-204ENST00000436439 PLPPR4Q7Z2D5 763 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 CCDC60Q8IWA6 550 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-204ENST00000436439 FAM178BQ8IXR5 827 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 NEK9Q8TD19 979 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 CLP1Q92989 425 aaKnown RBP12.21□□□□□ -0.45
HMGCL-204ENST00000436439 C1QTNF1Q9BXJ1 281 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 TSPY26PQ9H489 355 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 TTC12Q9H892 705 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-204ENST00000436439 C11orf16Q9NQ32 467 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 USP25Q9UHP3 1055 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 PCDHA2Q9Y5H9 948 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.45
HMGCL-204ENST00000436439 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.46
HMGCL-204ENST00000436439 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
HMGCL-204ENST00000436439 MSH4O15457 936 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms