RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ZNF541Q9H0D2 1346 aa13.25□□□□□ -0.29
CLDN4-203ENST00000435050 CYP3A4P08684 503 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 MXI1P50539 228 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 IGBP1P78318 339 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 KRT76Q01546 638 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 HDXQ7Z353 690 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 AZI2Q9H6S1 392 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 AGPAT3Q9NRZ7 376 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 FANCGO15287 622 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 TBC1D12O60347 775 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 PTK2Q05397 1052 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 SMC1AQ14683 1233 aaKnown RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 PGM5Q15124 567 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 DNAJC21Q5F1R6 531 aaKnown RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 CBWD1Q9BRT8 395 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 PSAPP07602 524 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 GPR162Q16538 588 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 SND1Q7KZF4 910 aaKnown RBP eCLIP13.24□□□□□ -0.291e-8■■■■■ 42.2
CLDN4-203ENST00000435050 USP37Q86T82 979 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 LY75O60449 1722 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 KIAA1551Q9HCM1 1747 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 TCP1P17987 556 aaKnown RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 PTPRAP18433 802 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 MCM3P25205 808 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 KLRC1P26715 233 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 JAK3P52333 1124 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 GYS2P54840 703 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 SPIRE1Q08AE8 756 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 GRM1Q13255 1194 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 CFAP221Q4G0U5 840 aa13.24□□□□□ -0.29
CLDN4-203ENST00000435050 AGO4Q9HCK5 861 aaKnown RBP13.24□□□□□ -0.29
CLDN4-203ENST00000435050 DDX60LQ5H9U9 1706 aaKnown RBP13.23□□□□□ -0.29
CLDN4-203ENST00000435050 A0A1W2PQJ5 194 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 ADM5C9JUS6 153 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 VSNL1P62760 191 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 CC2D1AQ6P1N0 951 aaPredicted RBP13.23□□□□□ -0.29
CLDN4-203ENST00000435050 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 PXMP2Q9NR77 195 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
CLDN4-203ENST00000435050 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 PON1P27169 355 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 PPP2R5CQ13362 524 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 HYIQ5T013 277 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 C1orf186Q6ZWK4 172 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 DPH6Q7L8W6 267 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 COG1Q8WTW3 980 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 IWS1Q96ST2 819 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 PDE11AQ9HCR9 933 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 JPH1Q9HDC5 661 aaPredicted RBP13.23□□□□□ -0.29
CLDN4-203ENST00000435050 CHORDC1Q9UHD1 332 aaPredicted RBP13.23□□□□□ -0.29
CLDN4-203ENST00000435050 FERP16591 822 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 FMO5P49326 533 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 VAMP7P51809 220 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 BRD3Q15059 726 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 STXBP2Q15833 593 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 NEK9Q8TD19 979 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 LMBR1Q8WVP7 490 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
CLDN4-203ENST00000435050 ODF2LQ9ULJ1 636 aa13.23□□□□□ -0.29
CLDN4-203ENST00000435050 ITGB3BPQ13352 177 aaPredicted RBP13.22□□□□□ -0.29
CLDN4-203ENST00000435050 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 FAM213AQ9BRX8 229 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 SLC9A2Q9UBY0 812 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 RARRES1P49788 294 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 CNTN2Q02246 1040 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 PROCA1Q8NCQ7 364 aaPredicted RBP13.22□□□□□ -0.29
CLDN4-203ENST00000435050 KRT12Q99456 494 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 MAST2Q6P0Q8 1798 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 PTGER2P43116 358 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 GUCY2FP51841 1108 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 OSTNP61366 133 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
CLDN4-203ENST00000435050 KCTD19Q17RG1 926 aaPredicted RBP13.22□□□□□ -0.29
CLDN4-203ENST00000435050 OSBPL9Q96SU4 736 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
CLDN4-203ENST00000435050 IREB2P48200 963 aaKnown RBP13.21□□□□□ -0.29
CLDN4-203ENST00000435050 SLC18A3Q16572 532 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 MEA1Q16626 185 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms