RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 H2AFY2Q9P0M6 372 aaPredicted RBP4.88□□□□□ -1.63
CLK1-204ENST00000432425 MAGEL2Q9UJ55 1249 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 DENND2AQ9ULE3 1009 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 ZNF891A8MT65 544 aaPredicted RBP4.87□□□□□ -1.63
CLK1-204ENST00000432425 MATN2O00339 956 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 ENPP3O14638 875 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 APOL3O95236 402 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 COMTP21964 271 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 CD40P25942 277 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 KPNA1P52294 538 aaPredicted RBP4.87□□□□□ -1.63
CLK1-204ENST00000432425 DSG1Q02413 1049 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 ADAM15Q13444 863 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 DALRD3Q5D0E6 543 aaKnown RBP4.87□□□□□ -1.63
CLK1-204ENST00000432425 POLNQ7Z5Q5 900 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 BCL6BQ8N143 479 aaPredicted RBP4.87□□□□□ -1.63
CLK1-204ENST00000432425 CFHR4Q92496 578 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 WWC2-AS2Q96NR7 200 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 TARS2Q9BW92 718 aaKnown RBP4.87□□□□□ -1.63
CLK1-204ENST00000432425 MTFR1LQ9H019 292 aa4.87□□□□□ -1.63
CLK1-204ENST00000432425 SLC26A4O43511 780 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 SCNN1BP51168 640 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 OCRLQ01968 901 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 KRTAP1-1Q07627 177 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 ADCY2Q08462 1091 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 MYBPC3Q14896 1274 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 PCBP1Q15365 356 aaKnown RBP eCLIP4.86□□□□□ -1.63
CLK1-204ENST00000432425 KIAA0907Q7Z7F0 614 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 OR2W6PQ8NHA6 318 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 SH3RF3Q8TEJ3 882 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 RTF1Q92541 710 aaKnown RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 GCDHQ92947 438 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 SLC7A6OSQ96CW6 309 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 DYDC2Q96IM9 177 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 ADOQ96SZ5 270 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 NELFAQ9H3P2 528 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 POLR3BQ9NW08 1133 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 SYNPO2Q9UMS6 1093 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 JAG2Q9Y219 1238 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 SLC30A1Q9Y6M5 507 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 FAM83GA6ND36 823 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 PRPF6O94906 941 aaKnown RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 IL2P60568 153 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 HGFACQ04756 655 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 PRKD1Q15139 912 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 CDSNQ15517 529 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 BMP8AQ7Z5Y6 402 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 SHCBP1Q8NEM2 672 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 GPR101Q96P66 508 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 MYL10Q9BUA6 226 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
CLK1-204ENST00000432425 CTDP1Q9Y5B0 961 aaPredicted RBP4.86□□□□□ -1.63
CLK1-204ENST00000432425 MATN3O15232 486 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 ANTXR2P58335 489 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 DUSP8Q13202 625 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 R3HDM1Q15032 1099 aaKnown RBP4.85□□□□□ -1.63
CLK1-204ENST00000432425 KIAA1841Q6NSI8 718 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 FAM89AQ96GI7 184 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 WDR92Q96MX6 357 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 SLC6A15Q9H2J7 730 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 POFUT1Q9H488 388 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 TBX22Q9Y458 520 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 TESMINQ9Y4I5 508 aa4.85□□□□□ -1.63
CLK1-204ENST00000432425 RBM8AQ9Y5S9 174 aaKnown RBP4.85□□□□□ -1.63
CLK1-204ENST00000432425 PMS2P1A4D2B8 440 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 GOLGA8BA8MQT2 603 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 DAPK3O43293 454 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 ACO1P21399 889 aaKnown RBP4.84□□□□□ -1.63
CLK1-204ENST00000432425 ATP2C1P98194 919 aaPredicted RBP4.84□□□□□ -1.63
CLK1-204ENST00000432425 RIN1Q13671 783 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 LRRC32Q14392 662 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 SEPT7Q16181 437 aaKnown RBP4.84□□□□□ -1.63
CLK1-204ENST00000432425 SPDYAQ5MJ70 313 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 SPRED1Q7Z699 444 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 SMC1BQ8NDV3 1235 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 RABGGTAQ92696 567 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 FERMT2Q96AC1 680 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 PLA2G3Q9NZ20 509 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 DNAI1Q9UI46 699 aa4.84□□□□□ -1.63
CLK1-204ENST00000432425 ST20-MTHFSA0A0A6YYL1 179 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 A0A1W2PRX2 142 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 PDE8AO60658 829 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 MYCLP1P12525 358 aaPredicted RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 TNFRSF1AP19438 455 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 MSX2P35548 267 aaPredicted RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 LSSP48449 732 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 BPIFB4P59827 614 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 SMAD3P84022 425 aaKnown RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 HHEXQ03014 270 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 GRM7Q14831 915 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 PLEKHG4Q58EX7 1191 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 ESPNLQ6ZVH7 1005 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 KANSL1Q7Z3B3 1105 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 GPR135Q8IZ08 494 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 LEO1Q8WVC0 666 aaPredicted RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 EDAQ92838 391 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 NKD2Q969F2 451 aaPredicted RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 TMEM176AQ96HP8 235 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 PITHD1Q9GZP4 211 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms