RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 WDR45BQ5MNZ6 344 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 RBM43Q6ZSC3 357 aaKnown RBP6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 MILR1Q7Z6M3 343 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 NCAPG2Q86XI2 1143 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 SLC41A1Q8IVJ1 513 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 CMIPQ8IY22 773 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 IL17REQ8NFR9 667 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 TDRD7Q8NHU6 1098 aaKnown RBP6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 DDX1Q92499 740 aaKnown RBP6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 EYA3Q99504 573 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 TRIM5Q9C035 493 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 XPO4Q9C0E2 1151 aaKnown RBP6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
NIPAL3-205ENST00000432012 GOLGA6L4A6NEF3 574 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 TISP43B9A030 160 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 B9A039 149 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 TOR1BO14657 336 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 BMP6P22004 513 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 PIK3CAP42336 1068 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 BPIFB3P59826 476 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 ZNF267Q14586 743 aaPredicted RBP6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 IER5Q5VY09 327 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 CREB3L3Q68CJ9 461 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 FAM173BQ6P4H8 233 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 UNC5AQ6ZN44 842 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 BRAPQ7Z569 592 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 NECAB2Q7Z6G3 386 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 NKAPQ8N5F7 415 aaKnown RBP6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 CLSTN2Q9H4D0 955 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 ECHDC1Q9NTX5 307 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 CGNQ9P2M7 1197 aaKnown RBP6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 CTNNA3Q9UI47 895 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 RBM8AQ9Y5S9 174 aaKnown RBP6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 ERICH4A6NGS2 130 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 YDJCA8MPS7 323 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 J3KRW8 73 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 EYA2O00167 538 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 PLD2O14939 933 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 RFPL3O75679 317 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 MYBL2P10244 700 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 MTHFD1P11586 935 aaKnown RBP6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 SLC5A1P13866 664 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 NAT1P18440 290 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 PSMA5P28066 241 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 BEND3Q5T5X7 828 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 TOGARAM2Q6ZUX3 1019 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 TRIM22Q8IYM9 498 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 CCDC112Q8NEF3 446 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 SCLYQ96I15 445 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 TRIM47Q96LD4 638 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 NLRP3Q96P20 1036 aa6.91□□□□□ -1.3
NIPAL3-205ENST00000432012 ZNF891A8MT65 544 aaPredicted RBP6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 KCNJ4P48050 445 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 ANKRD1Q15327 319 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 PCBP2Q15366 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 MZT2AQ6P582 158 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 NLRP8Q86W28 1048 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 DNAAF4Q8WXU2 420 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 MAP4K1Q92918 833 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 WNK4Q96J92 1243 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 ZCCHC17Q9NP64 241 aaKnown RBP6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 CLIP2Q9UDT6 1046 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 RAPGEFL1Q9UHV5 662 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
NIPAL3-205ENST00000432012 ERVV-1B6SEH8 477 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 PRKD3O94806 890 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 CDC25BP30305 580 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 RXRGP48443 463 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 USP14P54578 494 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 SNX16P57768 344 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 PPP2R2AP63151 447 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 ADCY1Q08828 1119 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 MTX1Q13505 466 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 TPD52L1Q16890 204 aaPredicted RBP6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 NBPF10Q6P3W6 841 aaKnown RBP6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 OR6P1Q8NGX9 317 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 NSUN5Q96P11 429 aaKnown RBP6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 SLC9A7Q96T83 725 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 EHMT1Q9H9B1 1298 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 NDOR1Q9UHB4 597 aa6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 COL2A1P02458 1487 aaPredicted RBP6.9□□□□□ -1.31
NIPAL3-205ENST00000432012 PI4KAP2A4QPH2 592 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 HIP1O00291 1037 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 IGF2BP3O00425 579 aaKnown RBP eCLIP6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 SLC27A2O14975 620 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 SIAH2O43255 324 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 CAVIN2O95810 425 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 ATP1A3P13637 1013 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 EIF2S2P20042 333 aaKnown RBP6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 GABPB1Q06547 395 aaPredicted RBP6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 LAMC2Q13753 1193 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 RNF219Q5W0B1 726 aaPredicted RBP6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 ZNF790Q6PG37 636 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 BLOC1S2Q6QNY1 142 aa6.89□□□□□ -1.31
NIPAL3-205ENST00000432012 GALNT5Q7Z7M9 940 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms