RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 PIGOQ8TEQ8 1089 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 TMEM40Q8WWA1 233 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 TOP1MTQ969P6 601 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 RAD9AQ99638 391 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 MTRQ99707 1265 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 GCOM2Q9BZD3 368 aaPredicted RBP19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 NKX2-4Q9H2Z4 354 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 ZNF576Q9H609 170 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 ERVK-5Q9HDB9 667 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 ST3GAL5Q9UNP4 418 aa19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 YBX2Q9Y2T7 364 aaKnown RBP19.37■□□□□ 0.69
CTDSP1-203ENST00000431127 ASAP2O43150 1006 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 DARSP14868 501 aaKnown RBP19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 IL17AQ16552 155 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 POTEGQ6S5H5 508 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 RHPN2Q8IUC4 686 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 SNX29Q8TEQ0 813 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 MYLIPQ8WY64 445 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 INO80BQ9C086 356 aaPredicted RBP19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 TSPYL2Q9H2G4 693 aaPredicted RBP19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 ATP6V0A4Q9HBG4 840 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 INSL6Q9Y581 213 aa19.36■□□□□ 0.69
CTDSP1-203ENST00000431127 SIP14410 1827 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 MXD4Q14582 209 aaPredicted RBP19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 PPP2R2DQ66LE6 453 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 FAM228AQ86W67 206 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 PRPF31Q8WWY3 499 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 TMEM143Q96AN5 459 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 AK8Q96MA6 479 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 COL4A3BPQ9Y5P4 624 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 UNC80Q8N2C7 3258 aa19.35■□□□□ 0.69
CTDSP1-203ENST00000431127 MICAL3Q7RTP6 2002 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 DENND3A2RUS2 1198 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 VWA3AA6NCI4 1184 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 CA3P07451 260 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 MYOGP15173 224 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 FAM117BQ6P1L5 589 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 TMCO2Q7Z6W1 182 aaPredicted RBP19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 KCTD17Q8N5Z5 321 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 MAFAQ8NHW3 353 aaPredicted RBP19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 ZNF668Q96K58 619 aaPredicted RBP19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 NLRP4Q96MN2 994 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 TMX1Q9H3N1 280 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 C1orf112Q9NSG2 853 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 BMP2KQ9NSY1 1161 aaPredicted RBP19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 KIAA1024Q9UPX6 916 aa19.34■□□□□ 0.69
CTDSP1-203ENST00000431127 A0A087WZ62 844 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 ARHGEF35A5YM69 484 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 UPP2O95045 317 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 SFPQP23246 707 aaKnown RBP eCLIP19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 HTRA4P83105 476 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 LAMTOR4Q0VGL1 99 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 RTN4RL1Q86UN2 441 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 MCPH1Q8NEM0 835 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 YME1L1Q96TA2 773 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 FDXACB1Q9BRP7 624 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 COL25A1Q9BXS0 654 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 XPNPEP1Q9NQW7 623 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 DDX19AQ9NUU7 478 aaKnown RBP19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 DNM3Q9UQ16 869 aa19.33■□□□□ 0.68
CTDSP1-203ENST00000431127 A0A087WWV3 80 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 PP2D1A8MPX8 630 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 RBAK-RBAKDNI3L0D1 243 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 SLC26A4O43511 780 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 USO1O60763 962 aaKnown RBP19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 STAG3L1P0CL83 205 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 ZSCAN20P17040 1043 aaPredicted RBP19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 TFDP1Q14186 410 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 GRIN2CQ14957 1233 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 ECM1Q16610 540 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 SLC24A5Q71RS6 500 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 SRGAP1Q7Z6B7 1085 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 KSR1Q8IVT5 923 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 LINC01599Q8WXQ3 324 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 ADAM2Q99965 735 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 NT5C3AQ9H0P0 336 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 RGS18Q9NS28 235 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 CDH23Q9H251 3354 aa19.32■□□□□ 0.68
CTDSP1-203ENST00000431127 SRGAP2CP0DJJ0 459 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 FOSL2P15408 326 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 CDC25AP30304 524 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 ARL2P36404 184 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 LONP1P36776 959 aaKnown RBP19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 POU5F1BQ06416 359 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 BECN1Q14457 450 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 PADI6Q6TGC4 694 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 NPAS4Q8IUM7 802 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 RNF149Q8NC42 400 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 SPRYD3Q8NCJ5 442 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 MMTAG2Q9BU76 263 aaKnown RBP19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 BHMT2Q9H2M3 363 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 IFT122Q9HBG6 1241 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 CHST12Q9NRB3 414 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 CLIC4Q9Y696 253 aa19.31■□□□□ 0.68
CTDSP1-203ENST00000431127 EYA4O95677 639 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 ZSCAN22P10073 491 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 CYP11B2P19099 503 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 UBA7P41226 1012 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms