RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RAD52P43351 418 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CACNB3P54284 484 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 HAND2P61296 217 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SPIRE1Q08AE8 756 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SGCGQ13326 291 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 PPP2R5DQ14738 602 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 FAM189A2Q15884 450 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 KRT71Q3SY84 523 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CAVIN4Q5BKX8 364 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 MAP3K21Q5TCX8 1036 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ARHGAP36Q6ZRI8 547 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 GALNTL5Q7Z4T8 443 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 AKAP14Q86UN6 197 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 NUDT13Q86X67 352 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SLC22A9Q8IVM8 553 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SLC15A3Q8IY34 581 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 HACE1Q8IYU2 909 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SPARTQ8N0X7 666 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TCF12Q99081 682 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TSEN34Q9BSV6 310 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 BRINP2Q9C0B6 783 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 UBE2OQ9C0C9 1292 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 MMRN2Q9H8L6 949 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 PAG1Q9NWQ8 432 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ATXN10Q9UBB4 475 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ASH2LQ9UBL3 628 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CD2APQ9Y5K6 639 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 RAD50Q92878 1312 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 DCAF8L1A6NGE4 600 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 PMM2O15305 246 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CBFA2T3O75081 653 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 GSTT2P0CG29 244 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 GSTT2BP0CG30 244 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 EIF4G2P78344 907 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 BTG3Q14201 252 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TAF5Q15542 800 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TIGD6Q17RP2 521 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CWF19L2Q2TBE0 894 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 FUT11Q495W5 492 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 AADATQ8N5Z0 425 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 IL17RDQ8NFM7 739 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 FGD4Q96M96 766 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 PRICKLE1Q96MT3 831 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 FRMD6Q96NE9 622 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 GBP5Q96PP8 586 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 C7orf25Q9BPX7 421 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 FTOQ9C0B1 505 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 LIN28AQ9H9Z2 209 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 IL1RAPL1Q9NZN1 696 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 FAM169AQ9Y6X4 670 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ZMYM3Q14202 1370 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 NCF1BA6NI72 391 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 NCF1CA8MVU1 366 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SCAMP2O15127 329 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 AXIN1O15169 862 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 NCAM2O15394 837 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ENO2P09104 434 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ALOX5P09917 674 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 MZF1P28698 734 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KRT9P35527 623 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 PHKA1P46020 1223 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 RPP38P78345 283 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ROR1Q01973 937 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 C2orf54Q08AI8 447 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 TUBB8Q3ZCM7 444 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 PPP6R3Q5H9R7 873 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CLEC2AQ6UVW9 174 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KRT25Q7Z3Z0 450 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 LRRC71Q8N4P6 559 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 OR6P1Q8NGX9 317 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KRT35Q92764 455 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ARHGEF26Q96DR7 871 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ERO1AQ96HE7 468 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 HIC2Q96JB3 615 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SETDB2Q96T68 719 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 C19orf43Q9BQ61 176 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 DDX23Q9BUQ8 820 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 TBC1D10AQ9BXI6 508 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 UPF3BQ9BZI7 483 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 NOL6Q9H6R4 1146 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KLC4Q9NSK0 619 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 FBXO40Q9UH90 709 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 RNF123Q5XPI4 1314 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 NESP48681 1621 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ANO9A1A5B4 782 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 RRN3P2A6NIE6 340 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 A8MVJ9 347 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 UBAP1LF5GYI3 381 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 PEX1O43933 1283 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 BRINP1O60477 761 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 UBL4AP11441 157 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ZAP70P43403 619 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ACAP2Q15057 778 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 USP39Q53GS9 565 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 LRRC34Q8IZ02 419 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CCNYL1Q8N7R7 359 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF565Q8N9K5 539 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 C3orf58Q8NDZ4 430 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 MAML1Q92585 1016 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KIFC2Q96AC6 838 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms