RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 GHRP10912 638 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 CYP11B2P19099 503 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 TXLNAP40222 546 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 SPECC1Q5M775 1068 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 PADI6Q6TGC4 694 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 FAM43BQ6ZT52 329 aaPredicted RBP22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 USP49Q70CQ1 688 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 ZNF410Q86VK4 478 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 DBF4BQ8NFT6 615 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 SEPT8Q92599 483 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 APBB2Q92870 758 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 TMEM143Q96AN5 459 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 MTIF3Q9H2K0 278 aaKnown RBP22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 CDHR5Q9HBB8 845 aa22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 BMP2KQ9NSY1 1161 aaPredicted RBP22.33■■□□□ 1.17
CSNK1E-207ENST00000430335 ARID2Q68CP9 1835 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 KARSQ15046 597 aaKnown RBP22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 AXDND1Q5T1B0 1012 aaPredicted RBP22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 OTOP2Q7RTS6 562 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 RHPN2Q8IUC4 686 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 TET1Q8NFU7 2136 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 PRPF31Q8WWY3 499 aaKnown RBP22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 OSMRQ99650 979 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 IFIH1Q9BYX4 1025 aaKnown RBP22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 GINS2Q9Y248 185 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 COL4A3BPQ9Y5P4 624 aa22.32■■□□□ 1.16
CSNK1E-207ENST00000430335 ABHD14A-ACY1A0A1B0GW23 586 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 EFCAB14O75071 495 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 PLCG1P19174 1290 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 NCLP19338 710 aaKnown RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 ARL2P36404 184 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 MXD4Q14582 209 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 SYT2Q8N9I0 419 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 RASSF8Q8NHQ8 419 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 LEO1Q8WVC0 666 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 TMEM40Q8WWA1 233 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 NLRP7Q8WX94 980 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 RNPC3Q96LT9 517 aaKnown RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 PPP1R16BQ96T49 567 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 PLIN2Q99541 437 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 SCAND2PQ9GZW5 306 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 AGO3Q9H9G7 860 aaKnown RBP22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 CCDC39Q9UFE4 941 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 PCDHA7Q9UN72 937 aa22.31■■□□□ 1.16
CSNK1E-207ENST00000430335 PLA2G4BP0C869 781 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 EIF4BP23588 611 aaKnown RBP22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 ME1P48163 572 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 LAMTOR4Q0VGL1 99 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 IKBKEQ14164 716 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 TCTN1Q2MV58 587 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 ODR4Q5SWX8 454 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 CHAMP1Q96JM3 812 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 SPATA32Q96LK8 384 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 GCOM2Q9BZD3 368 aaPredicted RBP22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 BLOC1S4Q9NUP1 217 aa22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 NOC2LQ9Y3T9 749 aaKnown RBP22.3■■□□□ 1.16
CSNK1E-207ENST00000430335 SIP14410 1827 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 A0A087WZ62 844 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 RPS6KA5O75582 802 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 DARSP14868 501 aaKnown RBP22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 CD52P31358 61 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 SLC12A3P55017 1021 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 POU5F1BQ06416 359 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 RINT1Q6NUQ1 792 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 C1orf186Q6ZWK4 172 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 KSR1Q8IVT5 923 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 LRRC15Q8TF66 581 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 SCLT1Q96NL6 688 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 FDXACB1Q9BRP7 624 aaPredicted RBP22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 POLR3FQ9H1D9 316 aaPredicted RBP22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 KCND2Q9NZV8 630 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 PADI3Q9ULW8 664 aa22.29■■□□□ 1.16
CSNK1E-207ENST00000430335 GPR182O15218 404 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 PAK2Q13177 524 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 LRIT3Q3SXY7 679 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 SHC4Q6S5L8 630 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 CCDC73Q6ZRK6 1079 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 FAM228AQ86W67 206 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 ASAP3Q8TDY4 903 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 RAD54LQ92698 747 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 ZNF668Q96K58 619 aaPredicted RBP22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 NLRP4Q96MN2 994 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 TIPINQ9BVW5 301 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 INO80BQ9C086 356 aaPredicted RBP22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 ERVK-5Q9HDB9 667 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 GPRC5CQ9NQ84 441 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 CHMP5Q9NZZ3 219 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 CXXC1Q9P0U4 656 aaPredicted RBP22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 STK17AQ9UEE5 414 aa22.28■■□□□ 1.16
CSNK1E-207ENST00000430335 LOXHD1Q8IVV2 1947 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 ZBBXA8MT70 800 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 GLRA2P23416 452 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 GUCY2CP25092 1073 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 TFDP1Q14186 410 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 FAM102BQ5T8I3 360 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 RRAGBQ5VZM2 374 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 MAEAQ7L5Y9 396 aa22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 IFNLR1Q8IU57 520 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 LARP4BQ92615 738 aaKnown RBP22.27■■□□□ 1.16
CSNK1E-207ENST00000430335 KIFAP3Q92845 792 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms