RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SRGAP2BP0DMP2 458 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 FGFR1P11362 822 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 CDC42EP1Q00587 391 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
MSH5-208ENST00000429846 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
MSH5-208ENST00000429846 HERC4Q5GLZ8 1057 aaPredicted RBP16.79■□□□□ 0.28
MSH5-208ENST00000429846 GALNT17Q6IS24 598 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
MSH5-208ENST00000429846 MOXD1Q6UVY6 613 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 RBM23Q86U06 439 aaKnown RBP16.79■□□□□ 0.28
MSH5-208ENST00000429846 ABI1Q8IZP0 508 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 LRRC71Q8N4P6 559 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 DAGLBQ8NCG7 672 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 MICAL1Q8TDZ2 1067 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 ZNF274Q96GC6 653 aaPredicted RBP16.79■□□□□ 0.28
MSH5-208ENST00000429846 CWH43Q9H720 699 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 TLE6Q9H808 572 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 CYP3A7-CYP3A51PA0A087WV96 503 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 FSCN2O14926 492 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 CHMP2AO43633 222 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 PSMD10O75832 226 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 DARSP14868 501 aaKnown RBP16.78■□□□□ 0.28
MSH5-208ENST00000429846 CYP3A7P24462 503 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 GPC3P51654 580 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 PLCB3Q01970 1234 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 UGCGQ16739 394 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 MIER3Q7Z3K6 550 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 RSPH1Q8WYR4 309 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 UNC45AQ9H3U1 944 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 DACT1Q9NYF0 836 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
MSH5-208ENST00000429846 BARX2Q9UMQ3 279 aaPredicted RBP16.78■□□□□ 0.28
MSH5-208ENST00000429846 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
MSH5-208ENST00000429846 M0R2N6 131 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 TARBP2Q15633 366 aaKnown RBP16.77■□□□□ 0.28
MSH5-208ENST00000429846 DUSP6Q16828 381 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 XKR3Q5GH77 459 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 ECHDC2Q86YB7 292 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 BLIDQ8IZY5 108 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 NLRP7Q8WX94 980 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
MSH5-208ENST00000429846 CASD1Q96PB1 797 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
MSH5-208ENST00000429846 HCSTQ9UBK5 93 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 PCDHGC5Q9Y5F6 944 aa16.77■□□□□ 0.28
MSH5-208ENST00000429846 A0A0U1RQF3 1178 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 EOMESO95936 686 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
MSH5-208ENST00000429846 ERVFC1P60507 584 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 KCNT2Q6UVM3 1135 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 RNF135Q8IUD6 432 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 MBOAT7Q96N66 472 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 ZNF558Q96NG5 402 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 MRPL9Q9BYD2 267 aaKnown RBP16.76■□□□□ 0.27
MSH5-208ENST00000429846 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
MSH5-208ENST00000429846 CHST12Q9NRB3 414 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 RNF19AQ9NV58 838 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 SEPT9Q9UHD8 586 aaPredicted RBP16.76■□□□□ 0.27
MSH5-208ENST00000429846 MUTYHQ9UIF7 546 aa16.76■□□□□ 0.27
MSH5-208ENST00000429846 USP15Q9Y4E8 981 aaPredicted RBP16.76■□□□□ 0.27
MSH5-208ENST00000429846 ZNF318Q5VUA4 2279 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 CARNS1A5YM72 827 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 LOC730098B7Z3J9 87 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 TDP2O95551 362 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 SFPQP23246 707 aaKnown RBP eCLIP16.75■□□□□ 0.27
MSH5-208ENST00000429846 DNM2P50570 870 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 KRT17Q04695 432 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 CBX2Q14781 532 aaPredicted RBP16.75■□□□□ 0.27
MSH5-208ENST00000429846 NONOQ15233 471 aaKnown RBP eCLIP16.75■□□□□ 0.27
MSH5-208ENST00000429846 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 KRT25Q7Z3Z0 450 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 ZNF410Q86VK4 478 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 ETNPPLQ8TBG4 499 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 TCF25Q9BQ70 676 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 JPH2Q9BR39 696 aaPredicted RBP16.75■□□□□ 0.27
MSH5-208ENST00000429846 PHF7Q9BWX1 381 aaPredicted RBP16.75■□□□□ 0.27
MSH5-208ENST00000429846 GCOM2Q9BZD3 368 aaPredicted RBP16.75■□□□□ 0.27
MSH5-208ENST00000429846 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
MSH5-208ENST00000429846 ENTPD7Q9NQZ7 604 aa16.75■□□□□ 0.27
MSH5-208ENST00000429846 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 C5orf42Q9H799 3197 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 PER2O15055 1255 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 CDKL5O76039 1030 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 NPY5RQ15761 445 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 MTERF2Q49AM1 385 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 PLPP4Q5VZY2 271 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 LRRC55Q6ZSA7 311 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 ZNF598Q86UK7 904 aaKnown RBP16.74■□□□□ 0.27
MSH5-208ENST00000429846 SUSD6Q92537 303 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 GJA10Q969M2 543 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 CEP89Q96ST8 783 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 TRAIPQ9BWF2 469 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 DDX25Q9UHL0 483 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms