RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 DSC3Q14574 896 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 XKR9Q5GH70 373 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 KCNK18Q7Z418 384 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 KSR1Q8IVT5 923 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 LRRC15Q8TF66 581 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 NKX2-4Q9H2Z4 354 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 BMP2KQ9NSY1 1161 aaPredicted RBP19.45■□□□□ 0.7
CTSD-203ENST00000429746 LRWD1Q9UFC0 647 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 AKT3Q9Y243 479 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 CLIC4Q9Y696 253 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 PRUNE2Q8WUY3 3088 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 DARSP14868 501 aaKnown RBP19.44■□□□□ 0.7
CTSD-203ENST00000429746 MUTP22033 750 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 RFC5P40937 340 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 EMC2Q15006 297 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 SF3A1Q15459 793 aaKnown RBP19.44■□□□□ 0.7
CTSD-203ENST00000429746 ARL6IP4Q66PJ3 421 aaKnown RBP19.44■□□□□ 0.7
CTSD-203ENST00000429746 TOP1MTQ969P6 601 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 TMEM143Q96AN5 459 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 MAP7D2Q96T17 732 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 TSPYL2Q9H2G4 693 aaPredicted RBP19.44■□□□□ 0.7
CTSD-203ENST00000429746 IFT122Q9HBG6 1241 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 SUCLA2Q9P2R7 463 aaPredicted RBP19.44■□□□□ 0.7
CTSD-203ENST00000429746 DBR1Q9UK59 544 aaKnown RBP19.44■□□□□ 0.7
CTSD-203ENST00000429746 ST3GAL5Q9UNP4 418 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 GINS2Q9Y248 185 aa19.44■□□□□ 0.7
CTSD-203ENST00000429746 M0QZ92 97 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 LINC00271P0C7V0 271 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 EIF4BP23588 611 aaKnown RBP19.43■□□□□ 0.7
CTSD-203ENST00000429746 TMOD1P28289 359 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 KCNJ6P48051 423 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 HYIQ5T013 277 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 DTHD1Q6ZMT9 781 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 OTUD6AQ7L8S5 288 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 SP7Q8TDD2 431 aaPredicted RBP19.43■□□□□ 0.7
CTSD-203ENST00000429746 PNMA5Q96PV4 448 aa19.43■□□□□ 0.7
CTSD-203ENST00000429746 SPTBN5Q9NRC6 3674 aaKnown RBP19.42■□□□□ 0.7
CTSD-203ENST00000429746 A0A087WZ62 844 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 CSDE1O75534 798 aaKnown RBP19.42■□□□□ 0.7
CTSD-203ENST00000429746 RPS6KA5O75582 802 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 CA3P07451 260 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 ARL2P36404 184 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 PAK2Q13177 524 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 PPP2R2DQ66LE6 453 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 ZNF710Q8N1W2 664 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 ASAP3Q8TDY4 903 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 PRPF31Q8WWY3 499 aaKnown RBP19.42■□□□□ 0.7
CTSD-203ENST00000429746 SLC7A3Q8WY07 619 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 USP28Q96RU2 1077 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 FDXACB1Q9BRP7 624 aaPredicted RBP19.42■□□□□ 0.7
CTSD-203ENST00000429746 PRDM12Q9H4Q4 367 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 MINDY3Q9H8M7 445 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 MORC2Q9Y6X9 1032 aaPredicted RBP19.42■□□□□ 0.7
CTSD-203ENST00000429746 UNC80Q8N2C7 3258 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 NCOR1O75376 2440 aa19.42■□□□□ 0.7
CTSD-203ENST00000429746 KIAA1671Q9BY89 1806 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 COL4A4P53420 1690 aaPredicted RBP19.41■□□□□ 0.7
CTSD-203ENST00000429746 VWA3AA6NCI4 1184 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 FGFR4P22455 802 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 CCT6AP40227 531 aaKnown RBP19.41■□□□□ 0.7
CTSD-203ENST00000429746 POLGP54098 1239 aaPredicted RBP19.41■□□□□ 0.7
CTSD-203ENST00000429746 TAP1Q03518 808 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 GRB10Q13322 594 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 HAUS3Q68CZ6 603 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 ZNF410Q86VK4 478 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 RHPN2Q8IUC4 686 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 MYOCDQ8IZQ8 938 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 SNX29Q8TEQ0 813 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 NACC1Q96RE7 527 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 JPH2Q9BR39 696 aaPredicted RBP19.41■□□□□ 0.7
CTSD-203ENST00000429746 COL4A3BPQ9Y5P4 624 aa19.41■□□□□ 0.7
CTSD-203ENST00000429746 FNDC1Q4ZHG4 1894 aaPredicted RBP19.41■□□□□ 0.7
CTSD-203ENST00000429746 NLRC5Q86WI3 1866 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 C9IYK1 514 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 GAS2O43903 313 aaKnown RBP19.4■□□□□ 0.7
CTSD-203ENST00000429746 DGAT1O75907 488 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 AMHP03971 560 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 LAMTOR4Q0VGL1 99 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 SPRYD3Q8NCJ5 442 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 ZNF689Q96CS4 500 aaPredicted RBP19.4■□□□□ 0.7
CTSD-203ENST00000429746 MTRQ99707 1265 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 FTHL17Q9BXU8 183 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 GPRC5CQ9NQ84 441 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 RGS18Q9NS28 235 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 DDX19AQ9NUU7 478 aaKnown RBP19.4■□□□□ 0.7
CTSD-203ENST00000429746 FBXO2Q9UK22 296 aaPredicted RBP19.4■□□□□ 0.7
CTSD-203ENST00000429746 KIAA1024Q9UPX6 916 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 ZDHHC9Q9Y397 364 aa19.4■□□□□ 0.7
CTSD-203ENST00000429746 PRRC2BQ5JSZ5 2229 aaKnown RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 EPOPA6NHQ4 379 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 E9PMD0 336 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 USO1O60763 962 aaKnown RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 POU3F3P20264 500 aaPredicted RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 GLRA2P23416 452 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 FAM189BP81408 668 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 NFX1Q12986 1120 aaKnown RBP19.39■□□□□ 0.69
CTSD-203ENST00000429746 CAPSQ13938 189 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 TMEM119Q4V9L6 283 aa19.39■□□□□ 0.69
CTSD-203ENST00000429746 FAM117BQ6P1L5 589 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms