RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	TARBP2	Q15633	366 aa	Known RBP	19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	KIZ	Q2M2Z5	673 aa		19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	FAM228A	Q86W67	206 aa		19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	METTL13	Q8N6R0	699 aa		19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	OSMR	Q99650	979 aa		19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	NRBP2	Q9NSY0	501 aa		19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	CLEC1B	Q9P126	229 aa		19.98	■□□□□ 0.79
MRPL28-203	ENST00000429738	GPR182	O15218	404 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	SLC37A4	O43826	429 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	DTNB	O60941	627 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	STBD1	O95210	358 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	STAG3L1	P0CL83	205 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	FDPS	P14324	419 aa	Known RBP	19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	XBP1	P17861	261 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	SARS	P49591	514 aa	Known RBP	19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	COASY	Q13057	564 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	ME3	Q16798	604 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	ODR4	Q5SWX8	454 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	PPP4R3A	Q6IN85	833 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	EFCAB12	Q6NXP0	572 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	MIER3	Q7Z3K6	550 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	KLHL23	Q8NBE8	558 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	CEP89	Q96ST8	783 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	ADAMTS10	Q9H324	1103 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	RGS18	Q9NS28	235 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	DDX25	Q9UHL0	483 aa	Known RBP	19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	ST3GAL5	Q9UNP4	418 aa		19.97	■□□□□ 0.79
MRPL28-203	ENST00000429738	CCDC194	A0A1B0GVG4	234 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	EIF5B	O60841	1220 aa	Known RBP	19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	LARGE1	O95461	756 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	TMOD1	P28289	359 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	LETM2	Q2VYF4	491 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	TRIM67	Q6ZTA4	783 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	ADGRD2	Q7Z7M1	963 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	NEK8	Q86SG6	692 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	ZNF710	Q8N1W2	664 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	SMRP1	Q8NCR6	262 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	OXER1	Q8TDS5	423 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	POF1B	Q8WVV4	589 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	GTF3C6	Q969F1	213 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	PPP1R16B	Q96T49	567 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	NIFK	Q9BYG3	293 aa	Known RBP	19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	KCNMB3	Q9NPA1	279 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	C1orf112	Q9NSG2	853 aa		19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	ORC3	Q9UBD5	711 aa	Predicted RBP	19.96	■□□□□ 0.79
MRPL28-203	ENST00000429738	TMEM221	A6NGB7	291 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	LOC730098	B7Z3J9	87 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738		C9IYK1	514 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738		M0R296	226 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	SEC24B	O95487	1268 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	NLRP11	P59045	1033 aa	Known RBP	19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	DSC3	Q14574	896 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	SLC24A5	Q71RS6	500 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	LRRC71	Q8N4P6	559 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	PBXIP1	Q96AQ6	731 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	MAP7D2	Q96T17	732 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	ADAM2	Q99965	735 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	AKT3	Q9Y243	479 aa		19.95	■□□□□ 0.78
MRPL28-203	ENST00000429738	GCFC2	P16383	781 aa	Known RBP	19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	NRIP1	P48552	1158 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	ZXDA	P98168	799 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	PPP2R5C	Q13362	524 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	CBX2	Q14781	532 aa	Predicted RBP	19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	PAN2	Q504Q3	1202 aa	Known RBP	19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	XKR3	Q5GH77	459 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	EARS2	Q5JPH6	523 aa	Known RBP	19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	NECAB1	Q8N987	351 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	WASF1	Q92558	559 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	FAM20A	Q96MK3	541 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	VAV3	Q9UKW4	847 aa		19.94	■□□□□ 0.78
MRPL28-203	ENST00000429738	IGKV6-21	A0A0C4DH24	114 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	DENND3	A2RUS2	1198 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	EIF4B	P23588	611 aa	Known RBP	19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	GATM	P50440	423 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	GPC3	P51654	580 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	FAM189B	P81408	668 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	TBC1D8B	Q0IIM8	1120 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	PIK3AP1	Q6ZUJ8	805 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	RBM23	Q86U06	439 aa	Known RBP	19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	NSUN7	Q8NE18	718 aa	Known RBP	19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	PRSS33	Q8NF86	280 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	HAS1	Q92839	578 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	TNFRSF25	Q93038	417 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	PRRX2	Q99811	253 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	LRFN2	Q9ULH4	789 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	PCDHB7	Q9Y5E2	793 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	CACNA1H	O95180	2353 aa		19.93	■□□□□ 0.78
MRPL28-203	ENST00000429738	TMEM150B	A6NC51	233 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	EML1	O00423	815 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	TBX3	O15119	743 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	NEK4	P51957	841 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	PTPN5	P54829	565 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	DRP2	Q13474	957 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	IER5L	Q5T953	404 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	PHF7	Q9BWX1	381 aa	Predicted RBP	19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	ELAC1	Q9H777	363 aa	Known RBP	19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	TLE6	Q9H808	572 aa		19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	RNF216	Q9NWF9	866 aa	Predicted RBP	19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	SEPT9	Q9UHD8	586 aa	Predicted RBP	19.92	■□□□□ 0.78
MRPL28-203	ENST00000429738	USP15	Q9Y4E8	981 aa	Predicted RBP	19.92	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms