RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 K7ENM7 598 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 KLRC4O43908 158 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 CCDC192P0DO97 292 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 CYP2C9P11712 490 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 PLS3P13797 630 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 TMOD1P28289 359 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 GJA8P48165 433 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 DNM2P50570 870 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZNF131P52739 623 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 TYRO3Q06418 890 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 DRP2Q13474 957 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 KCNB1Q14721 858 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 PPP2R5AQ15172 486 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 FAM26FQ5R3K3 315 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 MARCH8Q5T0T0 291 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 NT5DC1Q5TFE4 455 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 EFCAB12Q6NXP0 572 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 FAM178BQ8IXR5 827 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 DAW1Q8N136 415 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 TRIML1Q8N9V2 468 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 SPATA20Q8TB22 786 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 DEPTORQ8TB45 409 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 ASAP3Q8TDY4 903 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 PSPC1Q8WXF1 523 aaKnown RBP8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 HPS3Q969F9 1004 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 IFT74Q96LB3 600 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 CEP89Q96ST8 783 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 PPP1R16BQ96T49 567 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 ANP32EQ9BTT0 268 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 KIFC3Q9BVG8 833 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 MRPL44Q9H9J2 332 aaKnown RBP8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 LARSQ9P2J5 1176 aaKnown RBP8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 SUCLA2Q9P2R7 463 aaPredicted RBP8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 GTF2IRD1Q9UHL9 959 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 AKT3Q9Y243 479 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 GDAQ9Y2T3 454 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 IGKV6-21A0A0C4DH24 114 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 MBLAC1A4D2B0 266 aaPredicted RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 CCDC169A6NNP5 214 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 TREHO43280 583 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 RHOBTB3O94955 611 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 GCNT3O95395 438 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 VTNP04004 478 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 SARSP49591 514 aaKnown RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 RGS19P49795 217 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 PEX3P56589 373 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZNF200P98182 395 aaPredicted RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 LAMTOR4Q0VGL1 99 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 MORC3Q14149 939 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 TFDP1Q14186 410 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 HIC1Q14526 733 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 PTGISQ16647 500 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 DPCR1Q3MIW9 517 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 L1TD1Q5T7N2 865 aaKnown RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 IER5Q5VY09 327 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 GDF6Q6KF10 455 aaPredicted RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 TAF2Q6P1X5 1199 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 RUFY4Q6ZNE9 571 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 STXBP4Q6ZWJ1 553 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 SESTD1Q86VW0 696 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 RHPN2Q8IUC4 686 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 DIS3LQ8TF46 1054 aaKnown RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 PRPF31Q8WWY3 499 aaKnown RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 BSNDQ8WZ55 320 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 NLRP4Q96MN2 994 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 GTPBP4Q9BZE4 634 aaKnown RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 SENP6Q9GZR1 1112 aaPredicted RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 SLC39A2Q9NP94 309 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 PDLIM7Q9NR12 457 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 TRMT13Q9NUP7 481 aaKnown RBP8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 ANO10Q9NW15 660 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 SEL1LQ9UBV2 794 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 PCDHA2Q9Y5H9 948 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 GRIN2DO15399 1336 aa8.74□□□□□ -1.01
HMGA1P4-201ENST00000428643 TNRC18O15417 2968 aaPredicted RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 ARVCFO00192 962 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 SLC16A4O15374 487 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 PQBP1O60828 265 aaKnown RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 SRGAP2CP0DJJ0 459 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 MYBP10242 640 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 GLRA2P23416 452 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 NMT1P30419 496 aaKnown RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 HOXC8P31273 242 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 ARL2P36404 184 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 NAMPTP43490 491 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 PHKA2P46019 1235 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 NPTX2P47972 431 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 CASP5P51878 434 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 SMTNP53814 917 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 RTP1P59025 263 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 NLRP12P59046 1061 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 TMEM62Q0P6H9 643 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 STK4Q13043 487 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 PSMD2Q13200 908 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 MKRN4PQ13434 485 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms