RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 KRBA1A5PL33 1030 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 N4BP1O75113 896 aaKnown RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 DDAH1O94760 285 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 CFHP08603 1231 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ZSCAN20P17040 1043 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ALDH7A1P49419 539 aaKnown RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 CLCN3P51790 818 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 NLRP11P59045 1033 aaKnown RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 PUM1Q14671 1186 aaKnown RBP eCLIP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 CEP55Q53EZ4 464 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ZNF484Q5JVG2 852 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 FAM160B1Q5W0V3 765 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 SWSAP1Q6NVH7 229 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 PDXDC2PQ6P474 469 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 GPR149Q86SP6 731 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ZNF598Q86UK7 904 aaKnown RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 CABP7Q86V35 215 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 RAB11FIP4Q86YS3 637 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 SMC5Q8IY18 1101 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 MB21D2Q8IYB1 491 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 CCDC82Q8N4S0 544 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 DCLK2Q8N568 766 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 METTL13Q8N6R0 699 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 BCL7CQ8WUZ0 217 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ACSF2Q96CM8 615 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 TMEM169Q96HH4 297 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ZNF668Q96K58 619 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-216ENST00000428240 LZTS2Q9BRK4 669 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 ZNF302Q9NR11 478 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 MYO10Q9HD67 2058 aa9.3□□□□□ -0.92
ITSN1-216ENST00000428240 A0A0U1RQF3 1178 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 MEIS1O00470 390 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 STK25O00506 426 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 DHX15O43143 795 aaKnown RBP9.29□□□□□ -0.92
ITSN1-216ENST00000428240 ZC3H11AO75152 810 aaKnown RBP eCLIP9.29□□□□□ -0.92
ITSN1-216ENST00000428240 CTSAP10619 480 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 FGFR4P22455 802 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 KIF5BP33176 963 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 NUCB1Q02818 461 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 DIEXFQ68CQ4 756 aaKnown RBP9.29□□□□□ -0.92
ITSN1-216ENST00000428240 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 CCDC149Q6ZUS6 474 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 OTOP3Q7RTS5 596 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 HEATR3Q7Z4Q2 680 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 TMEM87AQ8NBN3 555 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 RSAD2Q8WXG1 361 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 HINFPQ9BQA5 517 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 ADAMTS10Q9H324 1103 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 SEMA4AQ9H3S1 761 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 DLL3Q9NYJ7 618 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 IRAK3Q9Y616 596 aa9.29□□□□□ -0.92
ITSN1-216ENST00000428240 FAM86B1E9PN63 330 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 CSDE1O75534 798 aaKnown RBP9.28□□□□□ -0.92
ITSN1-216ENST00000428240 IGHDP01880 384 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 DCNP07585 359 aaKnown RBP9.28□□□□□ -0.92
ITSN1-216ENST00000428240 FAM86B2P0C5J1 330 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 EIF4BP23588 611 aaKnown RBP9.28□□□□□ -0.92
ITSN1-216ENST00000428240 GNAQP50148 359 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 CLCN4P51793 760 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 BMS1Q14692 1282 aaKnown RBP9.28□□□□□ -0.92
ITSN1-216ENST00000428240 LONRF3Q496Y0 759 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 SPECC1Q5M775 1068 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 MIS18BP1Q6P0N0 1132 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 DDX53Q86TM3 631 aaKnown RBP9.28□□□□□ -0.92
ITSN1-216ENST00000428240 LRRC71Q8N4P6 559 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 LINC01465Q8N7H1 131 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
ITSN1-216ENST00000428240 IGSF21Q96ID5 467 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 VN1R3Q9BXE9 311 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 ANO3Q9BYT9 981 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 SFXN1Q9H9B4 322 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 CA14Q9ULX7 337 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 AKT3Q9Y243 479 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 DENND4AQ7Z401 1863 aa9.28□□□□□ -0.92
ITSN1-216ENST00000428240 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 MEIS3P2A8K0S8 358 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 PRC1O43663 620 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 B4GALT3O60512 393 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 GALTP07902 379 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 SP9P0CG40 484 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 DARSP14868 501 aaKnown RBP9.27□□□□□ -0.93
ITSN1-216ENST00000428240 GSPT1P15170 499 aaKnown RBP9.27□□□□□ -0.93
ITSN1-216ENST00000428240 POLGP54098 1239 aaPredicted RBP9.27□□□□□ -0.93
ITSN1-216ENST00000428240 GIT2Q14161 759 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 PTPN14Q15678 1187 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 LETM2Q2VYF4 491 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 WWC2Q6AWC2 1192 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 EFCAB12Q6NXP0 572 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 NFXL1Q6ZNB6 911 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 RUBCNQ92622 972 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 LPPQ93052 612 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 KLHL5Q96PQ7 755 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 MRPL9Q9BYD2 267 aaKnown RBP9.27□□□□□ -0.93
ITSN1-216ENST00000428240 NRDE2Q9H7Z3 1164 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 TBC1D17Q9HA65 648 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 RIC8AQ9NPQ8 531 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 DLGAP2Q9P1A6 1054 aa9.27□□□□□ -0.93
ITSN1-216ENST00000428240 IGSF9Q9P2J2 1179 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms