RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 YDJCA8MPS7 323 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 EYA4O95677 639 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 NR3C1P04150 777 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 ERVK-9P63128 1117 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 MAEAQ7L5Y9 396 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 IRF2BP2Q7Z5L9 587 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 ADAT2Q7Z6V5 191 aaKnown RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 RDH13Q8NBN7 331 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 CRYGNQ8WXF5 182 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 RUBCNQ92622 972 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 DYDC2Q96IM9 177 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 FAM107BQ9H098 131 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 PKD2L1Q9P0L9 805 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 SLX4Q8IY92 1834 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 FRMD3A2A2Y4 597 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 CEP104O60308 925 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 OPA1O60313 960 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 CIITAP33076 1130 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 FBXW10Q5XX13 1052 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 BTNL9Q6UXG8 535 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 FRMD5Q7Z6J6 570 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 IFT20Q8IY31 132 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 SYN2Q92777 582 aaPredicted RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 KDM4CQ9H3R0 1056 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 TYW1Q9NV66 732 aaKnown RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 PDXKO00764 312 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 OPLAHO14841 1288 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 SEC24CP53992 1094 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 TBC1D10BQ4KMP7 808 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 NAA35Q5VZE5 725 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 USP38Q8NB14 1042 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 TAF4BQ92750 862 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 POLR3CQ9BUI4 534 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 ZNF70Q9UC06 446 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 VAV3Q9UKW4 847 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 MRPL11Q9Y3B7 192 aaKnown RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 GREB1LQ9C091 1923 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 SPDYE2BA6NHP3 402 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 EBAG9O00559 213 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 SPDYE6P0CI01 402 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 FLT3P36888 993 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 MARSP56192 900 aaKnown RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 ZNF577Q9BSK1 485 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 METTL14Q9HCE5 456 aaKnown RBP14.12□□□□□ -0.15
COL12A1-205ENST00000425443 AIPL1Q9NZN9 384 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 TMEM59LQ9UK28 342 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 ZBTB21Q9ULJ3 1066 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 TRAF3IP3Q9Y228 551 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 TMX2Q9Y320 296 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 ATRNL1Q5VV63 1379 aa14.12□□□□□ -0.15
COL12A1-205ENST00000425443 AKAP3O75969 853 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 CPP00450 1065 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 GLE1Q53GS7 698 aaKnown RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 CFAP58Q5T655 872 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 RINT1Q6NUQ1 792 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 MAATS1Q7Z4T9 603 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 ATL2Q8NHH9 583 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 A0A087WUV0 522 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 TPD52L2O43399 206 aaKnown RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 GAP43P17677 238 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 ABCB4P21439 1286 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 NMT1P30419 496 aaKnown RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 UAP1Q16222 522 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 ZC2HC1CQ53FD0 456 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 ZNF772Q68DY9 489 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 FAM151AQ8WW52 585 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 TRIM31Q9BZY9 425 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 ZNF277Q9NRM2 450 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-205ENST00000425443 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
COL12A1-205ENST00000425443 CYP3A4P08684 503 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 UCHL3P15374 230 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 HPDP32754 393 aaPredicted RBP14.1□□□□□ -0.15
COL12A1-205ENST00000425443 PRPF4BQ13523 1007 aaKnown RBP14.1□□□□□ -0.15
COL12A1-205ENST00000425443 C11orf91Q3C1V1 193 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 KIAA1755Q5JYT7 1200 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 VPS36Q86VN1 386 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 SYCP3Q8IZU3 236 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 WDR18Q9BV38 432 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 TMEM39BQ9GZU3 492 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 PARVGQ9HBI0 331 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 STK32BQ9NY57 414 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 GCNT4Q9P109 453 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 PLAAQ9Y263 795 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 GFPT2O94808 682 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 ITGA4P13612 1032 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 LSP1P33241 339 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 MNAT1P51948 309 aa14.1□□□□□ -0.15
COL12A1-205ENST00000425443 HS2ST1Q7LGA3 356 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms