RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 GSTTP1A0A1W2PQM5 241 aa29.07■■■□□ 2.24
LDB1-202ENST00000425280 AFPP02771 609 aaKnown RBP29.07■■■□□ 2.24
LDB1-202ENST00000425280 ANKRD23Q86SG2 305 aa29.07■■■□□ 2.24
LDB1-202ENST00000425280 FAM186BQ8IYM0 893 aa29.07■■■□□ 2.24
LDB1-202ENST00000425280 KIFAP3Q92845 792 aa29.07■■■□□ 2.24
LDB1-202ENST00000425280 CRACR2AQ9BSW2 395 aa29.07■■■□□ 2.24
LDB1-202ENST00000425280 LSM14BQ9BX40 385 aaKnown RBP29.07■■■□□ 2.24
LDB1-202ENST00000425280 EDEM3Q9BZQ6 932 aa29.07■■■□□ 2.24
LDB1-202ENST00000425280 RIOK3O14730 519 aaKnown RBP29.06■■■□□ 2.24
LDB1-202ENST00000425280 DGAT1O75907 488 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 NOL4O94818 638 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 HNRNPH3P31942 346 aaKnown RBP29.06■■■□□ 2.24
LDB1-202ENST00000425280 CYP2J2P51589 502 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 LY6KQ17RY6 165 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 SLC9A9Q8IVB4 645 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 SLC17A8Q8NDX2 589 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 BAP1Q92560 729 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 EPN1Q9Y6I3 576 aaPredicted RBP29.06■■■□□ 2.24
LDB1-202ENST00000425280 UQCRHLA0A096LP55 91 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 UQCRHP07919 91 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 SOX10P56693 466 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 DCAF17Q5H9S7 520 aaPredicted RBP29.06■■■□□ 2.24
LDB1-202ENST00000425280 SPRYD7Q5W111 196 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 MORC4Q8TE76 937 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 SLC35C1Q96A29 364 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 XPNPEP1Q9NQW7 623 aa29.06■■■□□ 2.24
LDB1-202ENST00000425280 NDUFA10O95299 355 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 ARIH2O95376 493 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 GGPS1O95749 300 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 NPTX2P47972 431 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 ANKRD13CQ8N6S4 541 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 MCPH1Q8NEM0 835 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 BSNDQ8WZ55 320 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 PCYT2Q99447 389 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 DDX41Q9UJV9 622 aaKnown RBP29.05■■■□□ 2.24
LDB1-202ENST00000425280 PLAGL2Q9UPG8 496 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 A0A0U1RQJ8 604 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 OATP04181 439 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 CCNA1P78396 465 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 CDK17Q00537 523 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 DMP1Q13316 513 aaPredicted RBP29.05■■■□□ 2.24
LDB1-202ENST00000425280 METTL7BQ6UX53 244 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 ATRIPQ8WXE1 791 aa29.05■■■□□ 2.24
LDB1-202ENST00000425280 MYBPC2Q14324 1141 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 MTERF2Q49AM1 385 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 TCERG1LQ5VWI1 586 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 RRAGAQ7L523 313 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 TMEM161BQ8NDZ6 487 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 C17orf75Q9HAS0 396 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 ATP6V0A4Q9HBG4 840 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 CEP72Q9P209 647 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 FRMD4BQ9Y2L6 1034 aa29.04■■■□□ 2.24
LDB1-202ENST00000425280 CCDC169A6NNP5 214 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 SMTNP53814 917 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 KCNV1Q6PIU1 500 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 SPIRE2Q8WWL2 714 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 MCM3APO60318 1980 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 LRRC53A6NM62 1247 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 TISP43B9A030 160 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 APBA1Q02410 837 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 PDXDC1Q6P996 788 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 CACNA2D4Q7Z3S7 1137 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 FBXO16Q8IX29 292 aaPredicted RBP29.03■■■□□ 2.24
LDB1-202ENST00000425280 TMEM174Q8WUU8 243 aa29.03■■■□□ 2.24
LDB1-202ENST00000425280 NTPCRQ9BSD7 190 aaKnown RBP29.03■■■□□ 2.24
LDB1-202ENST00000425280 CGNQ9P2M7 1197 aaKnown RBP29.03■■■□□ 2.24
LDB1-202ENST00000425280 LOC102724159A0A0B4J2E5 919 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 ZBTB48P10074 688 aaPredicted RBP29.02■■■□□ 2.24
LDB1-202ENST00000425280 PWP2Q15269 919 aaKnown RBP29.02■■■□□ 2.24
LDB1-202ENST00000425280 C12orf56Q8IXR9 622 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 KIFC3Q9BVG8 833 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 NHEJ1Q9H9Q4 299 aaPredicted RBP29.02■■■□□ 2.24
LDB1-202ENST00000425280 MLXIPQ9HAP2 919 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 KMT5AQ9NQR1 393 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 MORF4L1Q9UBU8 362 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 DNAI1Q9UI46 699 aa29.02■■■□□ 2.24
LDB1-202ENST00000425280 REXO2Q9Y3B8 237 aaKnown RBP29.02■■■□□ 2.24
LDB1-202ENST00000425280 GCLCP48506 637 aaPredicted RBP29.01■■■□□ 2.24
LDB1-202ENST00000425280 RTP1P59025 263 aa29.01■■■□□ 2.24
LDB1-202ENST00000425280 SEPT1Q8WYJ6 367 aa29.01■■■□□ 2.24
LDB1-202ENST00000425280 NMRK2Q9NPI5 230 aa29.01■■■□□ 2.24
LDB1-202ENST00000425280 LZTFL1Q9NQ48 299 aa29.01■■■□□ 2.24
LDB1-202ENST00000425280 PHLPP2Q6ZVD8 1323 aa29.01■■■□□ 2.24
LDB1-202ENST00000425280 EXOC3O60645 756 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 CST9Q5W186 159 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 DPY19L2P1Q6NXN4 242 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 HVCN1Q96D96 273 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 NIFKQ9BYG3 293 aaKnown RBP29.01■■■□□ 2.23
LDB1-202ENST00000425280 GANQ9H2C0 597 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 NLRC4Q9NPP4 1024 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 TBX20Q9UMR3 447 aa29.01■■■□□ 2.23
LDB1-202ENST00000425280 FANCGO15287 622 aa29■■■□□ 2.23
LDB1-202ENST00000425280 TCF7P36402 384 aaPredicted RBP29■■■□□ 2.23
LDB1-202ENST00000425280 EMC2Q15006 297 aa29■■■□□ 2.23
LDB1-202ENST00000425280 CELF3Q5SZQ8 465 aaKnown RBP29■■■□□ 2.23
LDB1-202ENST00000425280 CCDC170Q8IYT3 715 aa29■■■□□ 2.23
LDB1-202ENST00000425280 AFAP1L1Q8TED9 768 aa29■■■□□ 2.23
LDB1-202ENST00000425280 POLR3FQ9H1D9 316 aaPredicted RBP29■■■□□ 2.23
LDB1-202ENST00000425280 PLXNB2O15031 1838 aa29■■■□□ 2.23
LDB1-202ENST00000425280 POLR2FP61218 127 aaKnown RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms