RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 MAEAQ7L5Y9 396 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 KCNG4Q8TDN1 519 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 NLRP7Q8WX94 980 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 PSPC1Q8WXF1 523 aaKnown RBP16.49■□□□□ 0.23
TMEM248-204ENST00000424964 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 OSMRQ99650 979 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
TMEM248-204ENST00000424964 CCSER1Q9C0I3 900 aa16.49■□□□□ 0.23
TMEM248-204ENST00000424964 SIP14410 1827 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 A0A1W2PPC1 479 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 SSBP05455 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM248-204ENST00000424964 IKBKEQ14164 716 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 KARSQ15046 597 aaKnown RBP16.48■□□□□ 0.23
TMEM248-204ENST00000424964 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 KCNK18Q7Z418 384 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 KCTD17Q8N5Z5 321 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
TMEM248-204ENST00000424964 SYMPKQ92797 1274 aaKnown RBP16.48■□□□□ 0.23
TMEM248-204ENST00000424964 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 NLRP4Q96MN2 994 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 CCDC39Q9UFE4 941 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
TMEM248-204ENST00000424964 SQORQ9Y6N5 450 aa16.48■□□□□ 0.23
TMEM248-204ENST00000424964 ASAP2O43150 1006 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 CUTAO60888 179 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 RPS6KA5O75582 802 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 SRGAP2CP0DJJ0 459 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 CYP11B2P19099 503 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 CD52P31358 61 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 ME1P48163 572 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
TMEM248-204ENST00000424964 PAK2Q13177 524 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 TMEM119Q4V9L6 283 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 GCOM2Q9BZD3 368 aaPredicted RBP16.47■□□□□ 0.23
TMEM248-204ENST00000424964 AGO3Q9H9G7 860 aaKnown RBP16.47■□□□□ 0.23
TMEM248-204ENST00000424964 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 RCOR1Q9UKL0 485 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
TMEM248-204ENST00000424964 A0A087WZ62 844 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 ABHD14A-ACY1A0A1B0GW23 586 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 PLA2G4BP0C869 781 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 PLCG1P19174 1290 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
TMEM248-204ENST00000424964 ODR4Q5SWX8 454 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 FAM102BQ5T8I3 360 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 ZNF410Q86VK4 478 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 TMEM40Q8WWA1 233 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 APBB2Q92870 758 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 SPATA32Q96LK8 384 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 FDXACB1Q9BRP7 624 aaPredicted RBP16.46■□□□□ 0.23
TMEM248-204ENST00000424964 POLR3FQ9H1D9 316 aaPredicted RBP16.46■□□□□ 0.23
TMEM248-204ENST00000424964 GPRC5CQ9NQ84 441 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 CXXC1Q9P0U4 656 aaPredicted RBP16.46■□□□□ 0.23
TMEM248-204ENST00000424964 CIZ1Q9ULV3 898 aaPredicted RBP16.46■□□□□ 0.23
TMEM248-204ENST00000424964 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 NOC2LQ9Y3T9 749 aaKnown RBP16.46■□□□□ 0.23
TMEM248-204ENST00000424964 SLC4A7Q9Y6M7 1214 aa16.46■□□□□ 0.23
TMEM248-204ENST00000424964 TRIOBPQ9H2D6 2365 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 GPR182O15218 404 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 EFCAB14O75071 495 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 EIF4BP23588 611 aaKnown RBP16.45■□□□□ 0.22
TMEM248-204ENST00000424964 ARL2P36404 184 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 KCNJ6P48051 423 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 DHX8Q14562 1220 aaKnown RBP16.45■□□□□ 0.22
TMEM248-204ENST00000424964 RRAGBQ5VZM2 374 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 SYT2Q8N9I0 419 aaPredicted RBP16.45■□□□□ 0.22
TMEM248-204ENST00000424964 RNF149Q8NC42 400 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
TMEM248-204ENST00000424964 PANK2Q9BZ23 570 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 PCDHA7Q9UN72 937 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 ST3GAL5Q9UNP4 418 aa16.45■□□□□ 0.22
TMEM248-204ENST00000424964 CSDE1O75534 798 aaKnown RBP16.44■□□□□ 0.22
TMEM248-204ENST00000424964 DARSP14868 501 aaKnown RBP16.44■□□□□ 0.22
TMEM248-204ENST00000424964 SLC12A3P55017 1021 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 TFDP1Q14186 410 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 MCM6Q14566 821 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 HABP4Q5JVS0 413 aaKnown RBP16.44■□□□□ 0.22
TMEM248-204ENST00000424964 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 RINT1Q6NUQ1 792 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 FAM228AQ86W67 206 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 ASAP3Q8TDY4 903 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 RAD54LQ92698 747 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 RUSC1Q9BVN2 902 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 INO80BQ9C086 356 aaPredicted RBP16.44■□□□□ 0.22
TMEM248-204ENST00000424964 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
TMEM248-204ENST00000424964 POLD4Q9HCU8 107 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 ERVK-5Q9HDB9 667 aa16.44■□□□□ 0.22
TMEM248-204ENST00000424964 MICAL3Q7RTP6 2002 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 FGFR4P22455 802 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms