RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PPIP5K2O43314 1243 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 MGRN1O60291 552 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 EVI5O60447 810 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 BUB1BO60566 1050 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-204ENST00000424143 MTA2O94776 668 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 ERCC3P19447 782 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 CHRNA3P32297 505 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 SHMT1P34896 483 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 SREBF1P36956 1147 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 ADCY2Q08462 1091 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 KIF22Q14807 665 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 GPIHBP1Q8IV16 184 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 CCDC197Q8NCU1 140 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 OR2W6PQ8NHA6 318 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-204ENST00000424143 SLC35G2Q8TBE7 412 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 RPS6KC1Q96S38 1066 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 EPB41L4BQ9H329 900 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 DMAC2Q9NW81 257 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 NYAP2Q9P242 653 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 MCM8Q9UJA3 840 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 KIF1CO43896 1103 aaKnown RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 UFL1O94874 794 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 FGGP02679 453 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 ALAS1P13196 640 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 MCCD1P59942 119 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 ARHGAP4P98171 946 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 DR1Q01658 176 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 QPCTQ16769 361 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 KIAA1755Q5JYT7 1200 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 TTBK2Q6IQ55 1244 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 STXBP4Q6ZWJ1 553 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 CPLX4Q7Z7G2 160 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 ANKS4BQ8N8V4 417 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 LENG9Q96B70 501 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 ROPN1BQ9BZX4 212 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 CENPHQ9H3R5 247 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 ROPN1Q9HAT0 212 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-204ENST00000424143 TUFT1Q9NNX1 390 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 KCND2Q9NZV8 630 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 USP20Q9Y2K6 914 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
C9orf3-204ENST00000424143 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 CFAP73A6NFT4 308 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 MEIS2O14770 477 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
C9orf3-204ENST00000424143 GNPATO15228 680 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 TGFB1I1O43294 461 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
C9orf3-204ENST00000424143 POTEIP0CG38 1075 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 TMOD1P28289 359 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 PMS2P54278 862 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 MAPK7Q13164 816 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 MFSD5Q6N075 450 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 POTEGQ6S5H5 508 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 CRELD2Q6UXH1 353 aaPredicted RBP16.49■□□□□ 0.23
C9orf3-204ENST00000424143 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
C9orf3-204ENST00000424143 ZNF536O15090 1300 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
C9orf3-204ENST00000424143 P4HA2O15460 535 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 PHF2O75151 1096 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 CTNNA2P26232 953 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 PTGIRP43119 386 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 FMO5P49326 533 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 SLMAPQ14BN4 828 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 DENND2CQ68D51 928 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 FAM186BQ8IYM0 893 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 AJAP1Q9UKB5 411 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 VAV3Q9UKW4 847 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 ADRA2BP18089 450 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 VCAM1P19320 739 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 ZNF131P52739 623 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 TRAF1Q13077 416 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 DCAF12L1Q5VU92 463 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 ZDHHC24Q6UX98 284 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 JAMLQ86YT9 394 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 HVCN1Q96D96 273 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
C9orf3-204ENST00000424143 JPH2Q9BR39 696 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 MTRF1LQ9UGC7 380 aaKnown RBP16.48■□□□□ 0.23
C9orf3-204ENST00000424143 DNAJC12Q9UKB3 198 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms